| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1001 |
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| Symbol | |
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| ID | 5297019 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | + |
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| Start bp | 1021611 |
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| End bp | 1024070 |
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| Gene Length | 2460 bp |
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| Protein Length | 819 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 640769285 |
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| Product | DNA mismatch repair protein MutS |
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| Protein accession | YP_001306247 |
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| Protein GI | 150020893 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0249] Mismatch repair ATPase (MutS family) |
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| TIGRFAM ID | [TIGR01070] DNA mismatch repair protein MutS |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.280502 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTAATT TGGAAAAATT AACTCCAATG ATGAAGCAAT ATATGGGGAT AAAGGAAAAA
TATAAAGATG CAATACTTTT ATTTAGACTT GGTGATTTTT ACGAAGCATT TTTTGAGGAT
GCGGAAATAA TCTCAAAAGT GTTGAATATT GTTTTAACAA AAAGGCAAAA TGCCCCCATG
GCGGGGATAC CGTACCATGC ATTAGATAAT TATTTAAAAA AACTTGTTGA AAGTGGGTAT
AAGGTTGCGA TATGTGAACA AATGGAAGAT GCATCTCAGG CAAAGGGAAT AGTGAAAAGA
GAAGTGACAA GGGTAATAAC TCCTGGTACT ATTATTGAAG ATGAACTTCT TTCAAATGAT
AATAATTATT TAATGGCGGT AATATTTGAT GAAAAATATG TTTCTGCCTT TATAGATGTT
TCAACTGGTG AATTGTTTTT GAAATCTTTT GATACCTTTT TAGAGTTTGT TGATTTTGTG
AAAATTTCAA GTATATCGCA AGTAATTTGT AGTAAAGAGT TGTTTGATAA ATTAAAAGAA
GAAATACCTC ACCTTTTTGT TGAAGAACTG GATGAATGGT ATTTTCAAGG CTATGAAGAA
AAGATAAAAG AAACATACGG GCTTTTTTCC ATTGAACATC TCGAAATAAC TGAACTTGAA
AAAAAGGTAT TAGGTGCTTT GTTTAAGTAC CTTGAATACA CTTTGATGGA AAATAAACCA
CCACAAAAAC CTAAAAGATT AGAAGGTTCA AAGTATATGA TTTTAGATTC AAAAACCGTT
GAAAATTTAT CTCTTATTCC TGGAGAAAAA GGTAAGAATT TATTTGATAT ACTTAATAAA
ACAAAGACGT CTATGGGAGC AAGGCTTTTA AAAAAGTGGA TTTTGCAACC TTTAAAAGAA
AAAAAAGAGA TATTGGAAAG GCAAAAGTTG GTAGAAGCGT TTTATAACGA TCATCTTCTT
TTAAATGAAG TAAGGGAATA CTTAAGTGGT GTTTATGACT TAGAGAGGAT TTTAACTAGA
TTAGGTTATG GAAAAGTTTC ACCTAAAGAT CTTGTTTCCC TGAAGAGAAG CCTGTATTTG
GTTCCAAGTA TAAAAGATGC TTTGAGAACT AATGAAAATC TAGTGAGTTT TGCACAGAGT
TTGAATGAAT TTAATGAAGT TGTAGGTATT TTGGAAAAAG CCTTGTATGA TGAGCCATCA
AATGCTCCAG GAGACGGTAA TGTAATAAAA GGTGGGTATT CTGTTGAATT AGATGATTAT
CGTAATTTGT TATTTCATTC TGAGGAAAAA CTCAAGGAGT TTCAAGAAAG TGAACGGGAA
AAGACTGGTA TTCAAAAATT AAGGGTAGGT TTTAATCAAG TCTTTGGGTA TTATATTGAA
GTACCAAAAG GTCAGGTGAA AAATGTTCCA GATTATTACA TTAGAAAGCA AACGCTTGTG
AATTCAGAAA GGTATATAAC GCAAGAATTG AAGGAATTTG AGGAAAAAAT AATGTCTGCT
CGTGAAAAGG TAGAATTGAT AGAAAAAAGT TTATTTGAAG AATTGAAACA GAAACTTTCT
GAGTATATAG ATGGTTTAAG AAATTTAGCA CAGAAGTTAT CTGAGCTAGA TGCTATTTCG
AACCTTGCTA TGGTTGCTAG ATTGTATGGA TATACAAAAC CCAAATTTAC AGGTGGAGAG
TTTTATGTGA AAAATGCTAG GCATGCTGTT GTTGAGCGGT ATGTTTCAGA TTTTGTGGCA
AATGATATAT ACATGGATGA TAGAAGGAGA ATGTATATAG TTACAGGTCC TAATATGAGT
GGGAAGAGTA CGTACATTAG ACAGGTAGGT TTAATAGCCG TTATGGCACA AATTGGTTCT
TTTGTACCGG CGGATGATGC AGAAATTCCC ATTTTTGATA GGGTATTCAC ACGAATGGGA
GCCCGTGATG ATATTTCAAC TGGTAAGAGT ACTTTTTTAA TAGAAATGAG TGAAGTAGCT
TTGATACTTG AAAAAGCTAC GAAAAAAAGT TTGGTGTTAT TGGATGAGGT TGGTAGAGGA
ACAAGTACAT TTGATGGAAT AAGTATTGCT TGGGCTATGA GTGAATATAT ATACAATGAA
ATAGGATGTG AAACTATGTT TGCAACTCAC TTTACGGAGC TTACAGAACT TTCAGATGTT
TATGAAGGAA TTAAAAATTT AACAATAGAG GTAAGGGAGA CAAACAATGG TGTGGTGTTT
TTGCATAAGG TTGTTGAAGG AATCGCAGAT AGAAGTTATG GTATAGAGGT TGCTCAAATA
GCTGGTGTTC CTGATGGAGT TGTAGAACGT GCAAAAGAGA TTTTAGATAT AATTTCTCAA
AAGAGTGAAC TTGAGAAAAA AGTAAGGGTT TTAAAGGAAG GACAACTTAA GAAGATAAAG
AGTAAGAAAA AAATACCAGA AGGACAACTT TCACTTTTCG AGGTGGGTGA CATAGAATGA
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| Protein sequence | MGNLEKLTPM MKQYMGIKEK YKDAILLFRL GDFYEAFFED AEIISKVLNI VLTKRQNAPM
AGIPYHALDN YLKKLVESGY KVAICEQMED ASQAKGIVKR EVTRVITPGT IIEDELLSND
NNYLMAVIFD EKYVSAFIDV STGELFLKSF DTFLEFVDFV KISSISQVIC SKELFDKLKE
EIPHLFVEEL DEWYFQGYEE KIKETYGLFS IEHLEITELE KKVLGALFKY LEYTLMENKP
PQKPKRLEGS KYMILDSKTV ENLSLIPGEK GKNLFDILNK TKTSMGARLL KKWILQPLKE
KKEILERQKL VEAFYNDHLL LNEVREYLSG VYDLERILTR LGYGKVSPKD LVSLKRSLYL
VPSIKDALRT NENLVSFAQS LNEFNEVVGI LEKALYDEPS NAPGDGNVIK GGYSVELDDY
RNLLFHSEEK LKEFQESERE KTGIQKLRVG FNQVFGYYIE VPKGQVKNVP DYYIRKQTLV
NSERYITQEL KEFEEKIMSA REKVELIEKS LFEELKQKLS EYIDGLRNLA QKLSELDAIS
NLAMVARLYG YTKPKFTGGE FYVKNARHAV VERYVSDFVA NDIYMDDRRR MYIVTGPNMS
GKSTYIRQVG LIAVMAQIGS FVPADDAEIP IFDRVFTRMG ARDDISTGKS TFLIEMSEVA
LILEKATKKS LVLLDEVGRG TSTFDGISIA WAMSEYIYNE IGCETMFATH FTELTELSDV
YEGIKNLTIE VRETNNGVVF LHKVVEGIAD RSYGIEVAQI AGVPDGVVER AKEILDIISQ
KSELEKKVRV LKEGQLKKIK SKKKIPEGQL SLFEVGDIE
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