| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0988 |
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| Symbol | |
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| ID | 5296882 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | + |
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| Start bp | 1007618 |
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| End bp | 1008163 |
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| Gene Length | 546 bp |
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| Protein Length | 181 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 640769272 |
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| Product | lipoprotein signal peptidase |
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| Protein accession | YP_001306234 |
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| Protein GI | 150020880 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0597] Lipoprotein signal peptidase |
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| TIGRFAM ID | [TIGR00077] lipoprotein signal peptidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00914153 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGTTTTGGA TTACTTTGGC GTTTGTAATA GATCAAATTA CAAAGTATAT AGCGACAAAT
TATTGGAGGT TTAATCCAAA AAAAGTGTTG TTTTTTTATT TTACCTATGC AACAAACAAA
GGGGTTGCAT TTGGGCTTTT TTCAAATTCA AAAGAAATAG TTGTGTATTT AACGCTTGCA
ATTACGATAT TTTTGTCTAT AATACCACTT GTAAAAAGAC TTGATTTTTT GACAAATATG
TTTCTGGGAT TTATTATTGG TGGAGCCTTA GGAAACGTAG TGGATAGAAT TAGATTTGGA
TATGTAGTAG ACTTTGTAAC TATGCCTTAC TGGCCCACAA TATACAATCT AGCTGATTTT
TTCATACTTT TAGGTGGTAT TGGAATTGCT ATAATTTCTT TGCGGAGGAG AGATGTTGGA
AATTCAAGTA ACAGCACGGG AGAAGGGTTG GAGATTAGAC AAATTTATTC AAGAAAAAGC
ACCAGACTGG ATATCGAGAA CGTACATTCA AAGAGCGATC AAGAGTGGAA TGGTAACAGT
AAATAA
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| Protein sequence | MFWITLAFVI DQITKYIATN YWRFNPKKVL FFYFTYATNK GVAFGLFSNS KEIVVYLTLA
ITIFLSIIPL VKRLDFLTNM FLGFIIGGAL GNVVDRIRFG YVVDFVTMPY WPTIYNLADF
FILLGGIGIA IISLRRRDVG NSSNSTGEGL EIRQIYSRKS TRLDIENVHS KSDQEWNGNS
K
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