Gene Tmel_0978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_0978 
SymbolrpsM 
ID5297055 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp1000553 
End bp1000921 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content31% 
IMG OID640769262 
Product30S ribosomal protein S13 
Protein accessionYP_001306224 
Protein GI150020870 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0099] Ribosomal protein S13 
TIGRFAM ID[TIGR03631] 30S ribosomal protein S13 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.24534 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCGTA TTGTTGGTGT TGAAATTCCA AATGATAAAA AGGTAGAAAT TGCACTTACA 
TATATATACG GTATAGGGAA AACAAGGGCA AAACAAATTT GTGAAGCTAC AAACATAGAT
CCAAATAAAA GAGTTAGAGA GTTAGGCGAT GAAGAAATAA GCAAAATTGC AACATTCATC
CAGCAAAATT ATAAGGTAGA AGGTGAATTA AGAACAGAGG TAATGCAGAA TATAAAAAGG
TTAATTGATA TAGGATGTTA TAGAGGTTTG AGACATAAAT TAGGTTTACC AGTTAGAGGA
CAAAAAACAA AATCTAATGC AAGAACAAGA AAAGGTCCAA GACCAAGTAG AATCAAGAAG
AAAAAATAA
 
Protein sequence
MARIVGVEIP NDKKVEIALT YIYGIGKTRA KQICEATNID PNKRVRELGD EEISKIATFI 
QQNYKVEGEL RTEVMQNIKR LIDIGCYRGL RHKLGLPVRG QKTKSNARTR KGPRPSRIKK
KK