Gene Tmel_0972 details

Gene Information

• Locus tag: Tmel_0972
• Symbol: rplO
• ID: 5297062
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermosipho melanesiensis BI429
• Kingdom: Bacteria
• Replicon accession: NC_009616
• Strand: +
• Start bp: 997036
• End bp: 997479
• Gene Length: 444 bp
• Protein Length: 147 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 640769256
• Product: 50S ribosomal protein L15
• Protein accession: YP_001306218
• Protein GI: 150020864
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0200] Ribosomal protein L15
• TIGRFAM ID: [TIGR01071] ribosomal protein L15, bacterial/organelle

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGATTAT CAGATATAAA ACCCACTCCT GGTTCTATGA AAAAAAGAAC AAGAGTAGGT 
AGAGGTATAG GTTCTGGTAA GGGAAAAACA TCGGGAAAAG GGCACAAAGG ACAAAAAGCA 
AGAGGAAGAG GAAAAGTACA TCCTTGGTTT GAAGGTGGGC AAACACCATT ACACAGAAGA 
TTGCCTAAAT TTGGTTTCAA AAACTTTACC AAAAAAGTAT ACAGTGTGGT TAATGTTGAA 
CAATTGGAAA AAATTTTTGA GTCAGGAGAA GAGGTAACAC CAGAAAAATT GTTGGAAAAA 
GGTGTAATAA AGAAGATAAA TGATGGAGTA AAAATTCTTG GAAATGGTGA AATTACAAAA 
CCACTAACAG TAATTGCCCA TGCCTTTAGT TCAAGTGCCA GGAGGAAGAT AGAAGCCGTT 
GGTGGCAAAG TAGAGGTGAT CTAA 

 

Protein sequence

MRLSDIKPTP GSMKKRTRVG RGIGSGKGKT SGKGHKGQKA RGRGKVHPWF EGGQTPLHRR 
LPKFGFKNFT KKVYSVVNVE QLEKIFESGE EVTPEKLLEK GVIKKINDGV KILGNGEITK 
PLTVIAHAFS SSARRKIEAV GGKVEVI