Gene Tmel_0970 details

Gene Information

• Locus tag: Tmel_0970
• Symbol: rpsE
• ID: 5297321
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermosipho melanesiensis BI429
• Kingdom: Bacteria
• Replicon accession: NC_009616
• Strand: +
• Start bp: 996304
• End bp: 996834
• Gene Length: 531 bp
• Protein Length: 176 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 640769254
• Product: 30S ribosomal protein S5
• Protein accession: YP_001306216
• Protein GI: 150020862
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0098] Ribosomal protein S5
• TIGRFAM ID: [TIGR01021] ribosomal protein S5, bacterial/organelle type

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAGATA TTGCACAGAA AATAAAGGCA ACAGGTGAAG ATTTTGAAGA AAGAATAGTT 
GAAATTAGAA GAACAACTAA AGTTACAAAG GGTGGAAAAA ATCTTTCATT TAGGGTTTTG 
GCTGTAGTTG GTAATAGAAA TGGGAAAGTT GGAGTTGGCG TTGGTAAAGC AAGAGAAGTA 
CCTGATGCTA TAAGAAAAGC TTTATCAGCT GCAAGGAGAA ATGTATTTAA AGTTCCTATA 
CATAACGGAA CAATTCCTCA TGAAATTGTT GGAAGACAAG ATGCTGCAAA GGTATTGTTG 
AAACCAGCAT CACCTGGTAC AGGTATAATT TCAAATGGTA CAGTTCGTGC AGTTGTAGAA 
TTGGCTGGTA TTCATAACAT ACTTACAAAA TCAAGTGGTT CTACAAACCC AGTGGTGCTA 
GCTCAAGCAA CTGTTAATGG ATTGAAAAAC CTCCTATCGT TGGAGAAAAT AGCAGAATTA 
AGAGATATTA CCCCACAAGA AGTTATTCAC GGCGTAAAGA AGGAGGGTTA A 

 

Protein sequence

MADIAQKIKA TGEDFEERIV EIRRTTKVTK GGKNLSFRVL AVVGNRNGKV GVGVGKAREV 
PDAIRKALSA ARRNVFKVPI HNGTIPHEIV GRQDAAKVLL KPASPGTGII SNGTVRAVVE 
LAGIHNILTK SSGSTNPVVL AQATVNGLKN LLSLEKIAEL RDITPQEVIH GVKKEG