| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0969 |
|---|
| Symbol | rplR |
|---|
| ID | 5297149 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermosipho melanesiensis BI429 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009616 |
|---|
| Strand | + |
|---|
| Start bp | 995921 |
|---|
| End bp | 996289 |
|---|
| Gene Length | 369 bp |
|---|
| Protein Length | 122 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 640769253 |
|---|
| Product | 50S ribosomal protein L18 |
|---|
| Protein accession | YP_001306215 |
|---|
| Protein GI | 150020861 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0256] Ribosomal protein L18 |
|---|
| TIGRFAM ID | [TIGR00060] ribosomal protein L18, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAAAAA AGGAGAACAG GAATTGGAGA AGGAAAAAGA GGCACTTGAG CATAAGAAAG
AAAATATATG GGACAGTCGA AAGGCCAAGA TTGTGTGTAT ATAAAAGTGA AAAACATATA
TATGCACAAA TAATTGACGA TGATAAAGGA CATACTTTAG TAGCAGCTTC CACATTGGAT
AAAGAATTAA GGGAAACCTT AAAGAAAACT TGGAACAAAG AAGCAGCACG TGAAGTTGGT
AAACTAATTG GTAAAAGGGC AATTGAAAAA GGTATAAAAA AAGTAGTATT TGATAGAGGC
GGATATAGAT ACCACGGAAG AGTTGCAGAA CTTGCTGAAG GTGCTAGAGA AGCAGGCTTG
GAATTTTAA
|
|---|
| Protein sequence | MIKKENRNWR RKKRHLSIRK KIYGTVERPR LCVYKSEKHI YAQIIDDDKG HTLVAASTLD
KELRETLKKT WNKEAAREVG KLIGKRAIEK GIKKVVFDRG GYRYHGRVAE LAEGAREAGL
EF
|
|---|
| |