Gene Tmel_0968 details

Gene Information

• Locus tag: Tmel_0968
• Symbol: rplF
• ID: 5297148
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermosipho melanesiensis BI429
• Kingdom: Bacteria
• Replicon accession: NC_009616
• Strand: +
• Start bp: 995351
• End bp: 995905
• Gene Length: 555 bp
• Protein Length: 184 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 640769252
• Product: 50S ribosomal protein L6
• Protein accession: YP_001306214
• Protein GI: 150020860
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0097] Ribosomal protein L6P/L9E
• TIGRFAM ID: [TIGR03654] ribosomal protein L6, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.569336
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCCGTA TTGCAAATAA ACCTATTGTT ATACCAAATG GAGTAGAAGT GAAAGTTGAG 
AATAATGTGT TTAAAGTAAA AGGACCAAAA GGAGAATTAA GCCAAGAGTT TCTCCCATAT 
ATCAAGATTG AAGTCAATGA AAATGAAATT TATGTGAAAC CAAATTTGGA GTTTATGAAG 
AGGAAATCAG ATCTAAAAAA GATGAAAATG TTTACAGGAA CATATTGGAG ACTTTTTAAT 
AATATGATTA TCGGTGTTAC ACAAGGATTT AGGAAAGAGT TAGAAATAAT TGGTATAGGT 
TATAGAGCAC AGTTACAAGG AAAGAAATTG GTAATGAATC TTGGATATGC TCATCCAGTT 
GAAATGGAAA TTCCATCTGA TGTTGCTGTA GAAGTACCTA GCCCAAATAG AATAGTTGTA 
AGCGGTATAG ATAAGCAGAG AGTAGGGCAA GTAGCGGCAG ATATTAGAAG ATGGAGAGAA 
CCAAATGTAT ATTCCGGAAA AGGAATCAGA TACGTAGGAG AAGTGGTAAG GTTGAAAGAA 
GGAAAGAAAG CATAA 

 

Protein sequence

MSRIANKPIV IPNGVEVKVE NNVFKVKGPK GELSQEFLPY IKIEVNENEI YVKPNLEFMK 
RKSDLKKMKM FTGTYWRLFN NMIIGVTQGF RKELEIIGIG YRAQLQGKKL VMNLGYAHPV 
EMEIPSDVAV EVPSPNRIVV SGIDKQRVGQ VAADIRRWRE PNVYSGKGIR YVGEVVRLKE 
GKKA