Gene Tmel_0960 details

Gene Information

• Locus tag: Tmel_0960
• Symbol: rplP
• ID: 5297910
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermosipho melanesiensis BI429
• Kingdom: Bacteria
• Replicon accession: NC_009616
• Strand: +
• Start bp: 992535
• End bp: 992963
• Gene Length: 429 bp
• Protein Length: 142 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 640769244
• Product: 50S ribosomal protein L16
• Protein accession: YP_001306206
• Protein GI: 150020852
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0197] Ribosomal protein L16/L10E
• TIGRFAM ID: [TIGR01164] ribosomal protein L16, bacterial/organelle

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.000390826
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTAATGC CAAAAAGAGT AAAGTATAGA AAACAACATA GAGGAAGAAT GAAGGGTAAA 
GCGAAAGGTG GTTCCTTGGT TGCATTTGGA GATTACGGTT TGAAGGCTTT AGAAGCACAT 
TGGATTACAG CACAACAAAT TGAGGCATGT AGAATTGCAA TTACAAGAAC TTTGAAAAAA 
TCTGGAAAAC TTTGGATTAG AATTTTTCCA GATAAGTCAT ATACAAAACA CCCGGCAGAG 
AGTAAGCTAG GAAAAGGTAA AGGTAACGTT GAAGGTTGGG TAGCAGTTGT AAAACCAGGA 
AGAGTGATGT TCGAAATAGG AGGAGTAAGT GAAGAACTAG CCAGAGAGGC ATTGGAATAT 
GCTGCGACAA AGCTTCCAAT AAGAACAAAA ATTGTAAAAA GACATGAGAT AGGTGGTGAA 
GCAGTATGA 

 

Protein sequence

MLMPKRVKYR KQHRGRMKGK AKGGSLVAFG DYGLKALEAH WITAQQIEAC RIAITRTLKK 
SGKLWIRIFP DKSYTKHPAE SKLGKGKGNV EGWVAVVKPG RVMFEIGGVS EELAREALEY 
AATKLPIRTK IVKRHEIGGE AV