Gene Tmel_0954 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_0954 
SymbolrplD 
ID5296854 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp989288 
End bp989953 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content36% 
IMG OID640769238 
Product50S ribosomal protein L4 
Protein accessionYP_001306200 
Protein GI150020846 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0088] Ribosomal protein L4 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000111144 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAAAG TTGATTTATT CAATATTAAA GGTGAAAACA TCGGAACAGT TGAATTAAAA 
GAGGAAGTTT TTGCAATTGA GCCAAATCAA GATGTCATGT GGCGTTATAT CGACATGCAA
CTTACAAATT CAAGAGCAGG AACTGCATCC ACAAAGACAC GTGGAGAAGT TTCTGGTGGT
GGAAGAAAAC CTTGGATTCA AAAGCACACA GGAAGAGCAA GGCAAGGTTC AATTAGAGCT
CCTCATTGGA GACATGGTGG AGTTGCTCAT GGTCCGAAAC CAAGGGTATA TTTTAAAAGA
TTAAACAAAA AAATGAAGAG ACTTGCTTTA AAATCTGCAT TGTCTTTAAG ATTAAAAGAG
AATAACTTAG TGGTGGTTGA CGATATTAAA TTTGAAAAGC CAAGAACAAA AGACTTGAGG
GAAGTTTTGA AAAACTTGGG ACTTGAAAAT CAAAAAGTTT TAATAGTACT TCCAAAAAAA
GAAAGTGAGT ATGAGAATGT AAAAATTTCT GGACGAAATA TTCCTGGTGT AAAAGTTTTG
ATTGCCGATA ATCCAGGAGT AGATAGAGTA AATATTGATG GTTTAAACGT TTACGATATT
TTAAACCATG ATAAACTTGT GCTCCTCCAG GGTACCGTCC AGAAGATTGA GGAGGTGCTC
GGATAA
 
Protein sequence
MAKVDLFNIK GENIGTVELK EEVFAIEPNQ DVMWRYIDMQ LTNSRAGTAS TKTRGEVSGG 
GRKPWIQKHT GRARQGSIRA PHWRHGGVAH GPKPRVYFKR LNKKMKRLAL KSALSLRLKE
NNLVVVDDIK FEKPRTKDLR EVLKNLGLEN QKVLIVLPKK ESEYENVKIS GRNIPGVKVL
IADNPGVDRV NIDGLNVYDI LNHDKLVLLQ GTVQKIEEVL G