| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0952 |
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| Symbol | rpsJ |
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| ID | 5296942 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | + |
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| Start bp | 988302 |
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| End bp | 988610 |
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| Gene Length | 309 bp |
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| Protein Length | 102 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 640769236 |
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| Product | 30S ribosomal protein S10 |
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| Protein accession | YP_001306198 |
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| Protein GI | 150020844 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0051] Ribosomal protein S10 |
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| TIGRFAM ID | [TIGR01049] ribosomal protein S10, bacterial/organelle |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000292109 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCAGGAC AGAAGATAAG AATAAGGTTG AAGGCATATG ATCATAAATT ATTAGATGAA
TCTGCAAAGA AAATTGTTGA AGTAGTAAAA CAAACAAATG CAAAGGTATC CGGGCCAGTA
CCATTGCCAA CTGAAAGAAC GTTATACGTT GTGTTAAGGT CACCATTAAA ACATAAAGAT
TCAAGAGAAC AATTTGAAAA AAGAGTACAC AAGAGAATGA TAGATATTTT GGAACCATCA
CCAAAGACTA TTGATGCGCT TATGAAAATA AATCTTCCTG CTGGAGTTGA CGTTGAAATC
AACTTGTGA
|
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| Protein sequence | MPGQKIRIRL KAYDHKLLDE SAKKIVEVVK QTNAKVSGPV PLPTERTLYV VLRSPLKHKD
SREQFEKRVH KRMIDILEPS PKTIDALMKI NLPAGVDVEI NL
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