Gene Tmel_0949 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_0949 
Symbol 
ID5297222 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp984446 
End bp984913 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content37% 
IMG OID640769233 
Product30S ribosomal protein S7 
Protein accessionYP_001306195 
Protein GI150020841 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0049] Ribosomal protein S7 
TIGRFAM ID[TIGR01029] ribosomal protein S7, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000145029 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAGAA GAAGAGCGGA AATTAGAAAA GTTCCACCTG ATCCAATTTA TAATGATGTT 
TTGGTTTCAA AACTTATCAA TAGAGTTATG TGGGATGGAA AGAAATCAAT AGCACAAAAA
ATTGTATACA AAGCGATGGA AATATTGGCG GAAAAGACAA AAAAGGCTCC TTTAGAAGCT
TTGCATCAAG CAATTGAGAA TGTTAGGCCA ATTGTAGAAG TAAGACCAAG GAGGGTTGGT
GGGGCTACTT ATCAAGTTCC AATTGAGGTA CAAGAGCCAA GAAAAACTTC TTTGGCGTTA
AGATGGATTG TTGAAGCTGC AAGAGCAAAA AAAGGCAGAC CAATGGCAGA AAAACTTGGT
GAGGAATTAG TCAATGCGTT TAACAATACA GGAACTGCTA TTAAGAAAAA AGAAGATGTA
CACAGAATGG CCGAAGCTAA CAGGGCATTT GCACATTTTA GATGGTAA
 
Protein sequence
MRRRRAEIRK VPPDPIYNDV LVSKLINRVM WDGKKSIAQK IVYKAMEILA EKTKKAPLEA 
LHQAIENVRP IVEVRPRRVG GATYQVPIEV QEPRKTSLAL RWIVEAARAK KGRPMAEKLG
EELVNAFNNT GTAIKKKEDV HRMAEANRAF AHFRW