| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0947 |
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| Symbol | gatA |
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| ID | 5297095 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 982212 |
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| End bp | 983585 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 640769229 |
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| Product | aspartyl/glutamyl-tRNA amidotransferase subunit A |
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| Protein accession | YP_001306193 |
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| Protein GI | 150020839 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | [TIGR00132] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00132132 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAACGAAT TTAGAAAACT TACCATAAAA GATGTATTAA AACGCAAGGA TGAAATTTAC
GTAAAAAAAT CTCTAGAAAC GATTAAACTC ATTGATGATA AAATAAACTC TTTTATAACT
ATCAATGAAA ATGCTAATGG CATTATTCCT ATTGCCGTAA AAGATAACAT CGTTACGAAA
GGCCTAAAAA CAACATGCGG GTCAAAACTT TTAGAAAATT TTGTCCCTTC TTTTGATGCA
ACTGTAGTAA AAAAGTTAAA GAAAAATAAT TTTGCAATTG TTGGAAAAAC AAATCTAGAT
GAGTTTGCAA TGGGAACAGG CACGGAGTTT TCTGCATTCT TTGTCACAAA AAATCCCTGG
GATAACGAAA GAGTTGCCGG GGGGAGTAGT GGGGGATCTG CGGCAGCTGT CGCTAGTGGA
GAGGTAGTCG CTGCTCTCGG GAGTGATACG GGAGGTTCTA TACGACAGCC TGCCGCATTT
TGCGGTGTAG TTGGATTTAA ACCAACCTAT GGTTTAGTTT CAAGATATGG TCTTGTAGCA
TTTGCCTCTT CTTTAGACCA GATTGGTCCT ATCACAAAAT CATCAGGAGA TGCCGCATAC
ATTATGAATA TAATTTCAGG CAAAGATGAA AACGACTCAA CAACTGTTGA AAAGAATATA
GACTTTGAAA GTTTATTAAA CGAAAATTTC TCTAATATCT CTGTTGCTTA CCCCGAAGAA
GTTTTTGGTG AAGGTATAGA AGAAGGAATA AAAATAAAAT TTGAAGAATT TATAAAATTC
TTAGAAAAAA AGAGAATAAA AGTAGAAAAA ATATCTTTTC CAGAATTAAA ATATGTAGTT
GCTACATACT ATATAATAGC ACCTGCTGAA GTAAGTTCAA ATTTATCGCG TTTTGACGGT
ATTAGATATG GCAATAGAAT AAAAAGCGAA GGACTTTTGG AAACTTATCT AAAAAGTAGG
AAGCAACTTG GTGAAGAAGT AATAAGAAGA ATTATGCTGG GAACATTTAC TTTAAGTGCA
GCATATTATG ACGCATACTT TGAAAAAGCA CAAAAAGTTC GAAGATTAAT ATCTAACACC
ATAAACAGTT TTCTCGAAAA ATATGATTTC ATAATTTCCC CAACTTCCCC AATCACCGCA
TTTAAAATTG GTGAAGTAAA AGACCCATTA GTGTATTATA TGATGGACAT TTTCACAATA
CCTGCAAATC TAGCAGGTCT TCCTGCGATA AGTATTCCAT TTGGATTTTC AAACAATTTG
CCAGTTGGAA TGCAAATAAT GGGTAAACGT TTTGATGATG CAAAGGTTTT GGGATTTGCA
AACTTTATTG AAAAAGATGT ACCAATTGTC TTTCCATGGG AGGCGAAAAA ATGA
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| Protein sequence | MNEFRKLTIK DVLKRKDEIY VKKSLETIKL IDDKINSFIT INENANGIIP IAVKDNIVTK
GLKTTCGSKL LENFVPSFDA TVVKKLKKNN FAIVGKTNLD EFAMGTGTEF SAFFVTKNPW
DNERVAGGSS GGSAAAVASG EVVAALGSDT GGSIRQPAAF CGVVGFKPTY GLVSRYGLVA
FASSLDQIGP ITKSSGDAAY IMNIISGKDE NDSTTVEKNI DFESLLNENF SNISVAYPEE
VFGEGIEEGI KIKFEEFIKF LEKKRIKVEK ISFPELKYVV ATYYIIAPAE VSSNLSRFDG
IRYGNRIKSE GLLETYLKSR KQLGEEVIRR IMLGTFTLSA AYYDAYFEKA QKVRRLISNT
INSFLEKYDF IISPTSPITA FKIGEVKDPL VYYMMDIFTI PANLAGLPAI SIPFGFSNNL
PVGMQIMGKR FDDAKVLGFA NFIEKDVPIV FPWEAKK
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