| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0946 |
|---|
| Symbol | gatB |
|---|
| ID | 5297094 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermosipho melanesiensis BI429 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009616 |
|---|
| Strand | - |
|---|
| Start bp | 980785 |
|---|
| End bp | 982215 |
|---|
| Gene Length | 1431 bp |
|---|
| Protein Length | 476 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 640769228 |
|---|
| Product | aspartyl/glutamyl-tRNA amidotransferase subunit B |
|---|
| Protein accession | YP_001306192 |
|---|
| Protein GI | 150020838 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) |
|---|
| TIGRFAM ID | [TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0828904 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGATTTA AACCTGTCAT TGGATTAGAA ATTCACGTCC AACTTAATAC TAAAACAAAA
GCTTTTTGTT CTTGTCCTGC TGATGTTTTT GAACTTGAAC CAAATAACGC AATATGTCCT
GTTTGTACTG GACAACCTGG TGCATTACCA GTCCCTTCAA AACAAATGTA TGAATTTGGT
ATTTTGCTTG CAGCCGCCTT AAATTGTAAA ATACATGAAT TTACAAGATT TGATAGAAAA
AACTATTTTT ATCCAGACCT TCCAAAGGGA TATCAGATTA CTCAATATTT TTATCCTCTC
GCCACAAATG GCTATTTGAA GCTTAATGGA AAAAAAATCA GAATAAATAG AATACATCTT
GAAGAAGATG CAGGGAAACT TCTCCATTCA TCAGAAACGA TAACTCAAGC GGAAAGCACA
TTAGTTGATA TGAACAGATG TGGTGTTCCA CTTGCAGAAA TTGTTACAGA ACCAGATATA
GAATCTCCTG AAGAAGCTAG GAAATTCTTG GAAAAACTAA GACAAATATT AAGATATTTA
GGTGTAAGTA CCGGAGACAT GGAAAAAGGA GCATTAAGAT GTGATGCTAA TATTTCAGTA
ATAGATTTGG AAAATAATGT CCAAAGCAAC AAAGTCGAAG TAAAAAATAT GAACTCATTC
AAATTCGTTG AAAAAGCATT GGAATATGAA TTTAATAGAA TTAAAAAGCA CCTTAAAAAA
GGAGAAAATG TTGTAAAAGA AACAAGAGGA TGGGATTTGG CATCAAAAAA GACAATTTCT
ATGAGAAGCA AAGAAGAAGC AAATGATTAC AGATATTTTC CTGAACCTGA TATTCCACCA
GTTGTTATTC CAAAAGAAGA AATTAATAAA ATTATTGAAA AAATACCGGA ATTACCCGAT
GAAAAAATAA ATAGATTTAA AATACAATAT GGACTGACAG ACTATGAAGC TGGAATTTTA
ACCACTTCCA TAAATCTTGC AAACTATTTC GAAGAATGTG TAAAAGAAAC GAAAAATCCA
AAAGAAACCT CAAATTGGTT TCTAACAGAA CTTTTAAAAT ATATCTCGCC TGAAGAGGTT
TTTGAAAATT TAAAGATAAA ACCAAAACAT TTTAAAGAAT TGTTTGATTT GATCTCTAGC
GGAAAAATAA CAAGAAATAT TGCAAAGGAA ATATTCAAAG AAATATTTGA AACTGGTAAA
AATCCGGAAG AAATAGTAAA AGAAAAGGGA ATAGAAGTAA TAGGTGATGA ATCTTTAATA
GAAGATATGT TAAAGAAAAT AATGGCGGAA AATGAAGATA AAGTTAATGC ATATAAAAAC
GGAAAGAAGG GATTATTGGG ATTTTTTGTT GGACAAATAA TGAAACAAAC AAAGGGAAAA
GCAGATGCAA AAAAGGCAAA CGAGATTGCC AAAAGATTGT TAGGAGACTG A
|
|---|
| Protein sequence | MRFKPVIGLE IHVQLNTKTK AFCSCPADVF ELEPNNAICP VCTGQPGALP VPSKQMYEFG
ILLAAALNCK IHEFTRFDRK NYFYPDLPKG YQITQYFYPL ATNGYLKLNG KKIRINRIHL
EEDAGKLLHS SETITQAEST LVDMNRCGVP LAEIVTEPDI ESPEEARKFL EKLRQILRYL
GVSTGDMEKG ALRCDANISV IDLENNVQSN KVEVKNMNSF KFVEKALEYE FNRIKKHLKK
GENVVKETRG WDLASKKTIS MRSKEEANDY RYFPEPDIPP VVIPKEEINK IIEKIPELPD
EKINRFKIQY GLTDYEAGIL TTSINLANYF EECVKETKNP KETSNWFLTE LLKYISPEEV
FENLKIKPKH FKELFDLISS GKITRNIAKE IFKEIFETGK NPEEIVKEKG IEVIGDESLI
EDMLKKIMAE NEDKVNAYKN GKKGLLGFFV GQIMKQTKGK ADAKKANEIA KRLLGD
|
|---|
| |