| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0944 |
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| Symbol | |
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| ID | 5297391 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 978765 |
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| End bp | 979892 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 640769226 |
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| Product | putative oxygen-independent coproporphyrinogen III oxidase |
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| Protein accession | YP_001306190 |
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| Protein GI | 150020836 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR00539] putative oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAAAAAT ATCTTTCAGA TTTAATTGGT AATTTAAACA AAATTTCATT ATATATACAC
ATACCTTTCT GCAAAAAAAA GTGTTATTAT TGCGATTTTG TAAGTTATAC AGAAGGTAGT
GTAGAAAACT ACATAGAAGC TTTAATAACT GAACTAAAAC TATATGAAAA ATATCTAGAA
AAGGGCATAA AAACATTGTA TATTGGTGGA GGAACACCAA GTTATATTAA CGAACATTAT
ATAGAGAAAC TGGTAATGTT TTTAAATAAA TACTTACAAC TCGAGGAGTT TACAATAGAA
GTAAATCCAG ATTCTTTTGA TAGCGAAAAA GCATATTTTT ATAAAAGTTT AGGCACTAAT
AGAATTAGCT TGGGAATACA ATCTCTTGAT GATACAGTAT TAAAGAGAGC TGGTAGAACA
CATAACAGCT ATCAAGCATA CAAAGCTTAT GAAATTGCAA AAGGAATATT TAATAACATA
AATGTAGATT TTATAATAGG ACTACCCGGT GAATCTTGGA AAAGTATTGA AAAAATTGTT
GATTTTATAA GGCTTGAACA TCCAAAGCAT ATCTCTGTTT ACCTACTCGA AATTCATGAA
GGAACTTTTC TATCAAAAAT TATGAAAAAA ATACCAGATG AATCATTTGA AAGACATGAT
GCTTTATTAG ACTTTTTAAA GACAGAAGGC TATGAAAGAT ATGAAATATC AAATTTCGCG
CTAAACGAAA ACTATAGCAA ACACAATCTG GTTTACTGGG CAAATAGAGA ATATATAGGT
GTTGGCCTAT CAGCAGGTGG ACACTTTGAT AATTTTAGAT ACAACAACGT TTCGGATTTC
AAAAGTTACT TTTTAAAATT AAAAAATGGA AAATTTCCTT ATGGATATCA GTCGAAAAAT
ACAAAAGAAA AAGAAATACT TGAAACTATA TTTATGATGC TCAGAACAAA ATGGGGAATA
GATAAAAAAT TGGTGCATAT TAACTTTGAA ATTGAAAACA TCTTAAATAC TTTAAAAAGA
AAATTTACAT TTTTTGATGG TACCAGATTA AGCGAAAAAG GTATGGATTT TTCTTCAATG
TTTTTTTCAG AGCTTTTAAT GCTTTGGGAG GAATTTTATG AGATATAG
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| Protein sequence | MEKYLSDLIG NLNKISLYIH IPFCKKKCYY CDFVSYTEGS VENYIEALIT ELKLYEKYLE
KGIKTLYIGG GTPSYINEHY IEKLVMFLNK YLQLEEFTIE VNPDSFDSEK AYFYKSLGTN
RISLGIQSLD DTVLKRAGRT HNSYQAYKAY EIAKGIFNNI NVDFIIGLPG ESWKSIEKIV
DFIRLEHPKH ISVYLLEIHE GTFLSKIMKK IPDESFERHD ALLDFLKTEG YERYEISNFA
LNENYSKHNL VYWANREYIG VGLSAGGHFD NFRYNNVSDF KSYFLKLKNG KFPYGYQSKN
TKEKEILETI FMMLRTKWGI DKKLVHINFE IENILNTLKR KFTFFDGTRL SEKGMDFSSM
FFSELLMLWE EFYEI
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