Gene Tmel_0940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_0940 
Symbol 
ID5296523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp975298 
End bp976479 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content26% 
IMG OID640769222 
Producthypothetical protein 
Protein accessionYP_001306186 
Protein GI150020832 
COG category[R] General function prediction only 
COG ID[COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAGAAA CAAACAACAC TAAGTTAATT ATATTATCTG TAATTATTAT TTTCTTAAAC 
GGCTTTTCTC TAAATGGTTT TGTTATATTT TTAGATTTTT TAGTTATTTT AGAGTGGATT
TACTATCATA AAGTTAAAAA GAATATAGAA AAACTGGATG TAAGTTTTTC TCTAACAAAC
ACGAGATTTT TCATAGGTGA AAAAGTTAAA TTAACCGTTT ATTTAAACCA AAATTTCGAA
TGCTTTCTTT CGATACCAGA GATAGGCATC TCCAAAATTC CACTAAAAGA TAAAGTAACA
TTAACCTACA CCTCAAACAA AAGGGGAATT AAAAAAATAA ATTATCTATT TTTAAAACAT
GAAACCTTTT TGTTTAATCT TATAAAGAAA TTGGAAAAAG GTATCGAAGT TATATTTTTT
CCAGAGTTTG AACCTGTAAA TTTTAGAAAA GAAGAATTAC TTGATTTAAT TCCCAACCTG
AAATCTAACA TTAGGTTATT AGAAGATACT TCTTATTTTG TAGGTATTAG AAAATATCAA
AACGATCCTA TAAGAAAAAT AAATTGGAAA ATTTCCGCAA AACTCAATGA CTTATATGTA
AAAAACTACG AATACACTTC TCAAGGAAAA ATTATTTTCT CTAGTTTTTT AAACCTCCAC
AGTGATTTAA AGAATAAGGA AGCTTGGAAA TACATTCTTC CAAAATACGT AGAAGATAGC
ATATACGCTT TAAACAGCAT GATAAAAGAC GTAGGAAGTA GAAATATACC TCTAAAATTG
TTTATTGACT CCTCAAAAGG AATTAAAAAA AATTCCTTTG AAAATTGGAT AGACTGTTTT
GAAATACTTG CCACATCATA CGGTGGGTAC AAATTTAACT ATGAAATTTA CAACGAGATA
AAAAAAGAAA TTAGATATAA TGACACACTG GTAATAATAA CTATGTTTTT AGGAGAGAAG
GATTTAAAAG AAATTTTAAA AATAAGGGAA ATTATCACAA AAATAATAGT ACTTGTAATG
CCCTTTGGCT TTAGAAGAAC AAATATAAAA AAATTCAAAA GTTTTCTAGA AATACCTTAT
GAATTAAAAC GTCTAAAAAA ACACATAGGT GTACTAAGAG AAAATAACGT TCATATTGTT
CTATATGACG AAAACAATTT ATTGCAGGAG GGGCTAATTT GA
 
Protein sequence
MIETNNTKLI ILSVIIIFLN GFSLNGFVIF LDFLVILEWI YYHKVKKNIE KLDVSFSLTN 
TRFFIGEKVK LTVYLNQNFE CFLSIPEIGI SKIPLKDKVT LTYTSNKRGI KKINYLFLKH
ETFLFNLIKK LEKGIEVIFF PEFEPVNFRK EELLDLIPNL KSNIRLLEDT SYFVGIRKYQ
NDPIRKINWK ISAKLNDLYV KNYEYTSQGK IIFSSFLNLH SDLKNKEAWK YILPKYVEDS
IYALNSMIKD VGSRNIPLKL FIDSSKGIKK NSFENWIDCF EILATSYGGY KFNYEIYNEI
KKEIRYNDTL VIITMFLGEK DLKEILKIRE IITKIIVLVM PFGFRRTNIK KFKSFLEIPY
ELKRLKKHIG VLRENNVHIV LYDENNLLQE GLI