Gene Tmel_0927 details

Gene Information

• Locus tag: Tmel_0927
• ID: 5297002
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermosipho melanesiensis BI429
• Kingdom: Bacteria
• Replicon accession: NC_009616
• Strand: +
• Start bp: 963416
• End bp: 964015
• Gene Length: 600 bp
• Protein Length: 199 aa
• Translation table: 11
• GC content: 30%
• IMG OID: 640769209
• Product: dTMP kinase
• Protein accession: YP_001306173
• Protein GI: 150020819
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0125] Thymidylate kinase
• TIGRFAM ID: [TIGR00041] thymidylate kinase

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.0241028
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTATAG CATTTGAAGG AATAGATGGT TCTGGAAAAA GTACGCAACT TGTTCTTTTG 
GAGAAATATT TAATAAATAG AGGAAAAAAA GTAATAAAAG TTAGAGAACC AGGCGGGACT 
ATTTTAGGTG AAAAAATTAG AGATTTGCTT TTAAACTTTA ATATGAATAA AAGAAGTGAA 
CTTTTATTGT TTCTTGCCTC GCGAGCACAA TTAGTTGAAG AGGTTATAAG GCCTTCTATT 
GAAAAGGGAT ATTTTGTTTT GGCGGATAGA TTTTCAGATT CAAGTATTGC ATATCAGGGA 
GGAGCAAGAA ATTTAGGAAA AGATTTAGTT GAGAAATTAA ATATTTTTGC AACAAATGGG 
ATTTTTCCAG ATATTGTGTT TTTTATAGAT ATTCCCGTTC AAATGGCGGT AAGGAGAATG 
AAAGAAAAGG AAAAAGATAG AATTGAGAAA GAAGGAGAGG ACTTTTTAGA AAAGGTAAGA 
ACTACGTACC TCCATATTGC AAAAAGTAGA AAAAACTTTT TTGTGATTGA TGGTACAAAA 
GATGTGGATT ATGTATTTTC TCAAATAAAA AGGATAATAG ATACTATGTT AGATCATTGA 

 

Protein sequence

MFIAFEGIDG SGKSTQLVLL EKYLINRGKK VIKVREPGGT ILGEKIRDLL LNFNMNKRSE 
LLLFLASRAQ LVEEVIRPSI EKGYFVLADR FSDSSIAYQG GARNLGKDLV EKLNIFATNG 
IFPDIVFFID IPVQMAVRRM KEKEKDRIEK EGEDFLEKVR TTYLHIAKSR KNFFVIDGTK 
DVDYVFSQIK RIIDTMLDH