| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0925 |
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| Symbol | rplT |
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| ID | 5296776 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | + |
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| Start bp | 962152 |
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| End bp | 962508 |
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| Gene Length | 357 bp |
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| Protein Length | 118 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 640769207 |
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| Product | 50S ribosomal protein L20 |
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| Protein accession | YP_001306171 |
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| Protein GI | 150020817 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0292] Ribosomal protein L20 |
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| TIGRFAM ID | [TIGR01032] ribosomal protein L20 |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00218095 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGTGTAA AAAATGCAGT TAATGCAAAG AAAAAAAGAA AAAAAATAAT GAAAGCGGTA
AAAGGATATC GTGGAGCATT AAGTAGAAGA TACAGACTAG CAAAACAAGC ATATATAAAG
GCAAAAAAAC ATGCGTATGT GGGTAGAAAA CTCAAGAAAA GAGATTATAG AAAACTTTGG
ATTACAAGAA TAAATATTGC AGCACGTAAT GAAGGGTTGA AATACAACGA ACTTATTCAC
GGTCTAAAGA TTTCTGGAAT TAATATTAAT AGAAAGATGT TGGCTGAACT TGCTGTTAAT
GATCCCGAAT CTTTCAAAGA ATATGTGAAT ATTGCTAAAC AAGCAATTGG AAAATAA
|
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| Protein sequence | MRVKNAVNAK KKRKKIMKAV KGYRGALSRR YRLAKQAYIK AKKHAYVGRK LKKRDYRKLW
ITRINIAARN EGLKYNELIH GLKISGININ RKMLAELAVN DPESFKEYVN IAKQAIGK
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