Gene Tmel_0923 details

Gene Information

• Locus tag: Tmel_0923
• Symbol: infC
• ID: 5297980
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermosipho melanesiensis BI429
• Kingdom: Bacteria
• Replicon accession: NC_009616
• Strand: +
• Start bp: 961484
• End bp: 961909
• Gene Length: 426 bp
• Protein Length: 141 aa
• Translation table: 11
• GC content: 32%
• IMG OID: 640769205
• Product: translation initiation factor IF-3
• Protein accession: YP_001306169
• Protein GI: 150020815
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0290] Translation initiation factor 3 (IF-3)
• TIGRFAM ID: [TIGR00168] translation initiation factor IF-3

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.0000477215
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCGATTG ATAAGGCACT TGAGCTTGCC TACTCGCAAA AACTAGACCT TATTTTAGTT 
GCTCCGAATG CAAAACCACC TGTTGCTAAA ATAATGGATT ATGGAAAGTA TAAATATGAG 
CTTTCAAAGA AAGAGAAAAA AGCAAAGAAA AATCAAAAAA TAATCGAAGT TAAACAGATG 
AAGTTTAGAA TAAAGATAGA TGAACATGAT TATCAAACTA AGGTAAAACA TATAAAGAGG 
TTTATTGAGT CCGGAAACAA AGTAAGAGTT GTAATAATGT TTAGGGGAAG AGAACTTGCC 
TTTGCGGATA AAGGAAAAGA AATCCTAGAT AGAATAAAAG AAGATTTAAG AGATATTGCA 
GTTGTAGAAA AGCAACCAAA ATTAGAAGGA AGAGACATGT GGATGATGTT AAAACCTAAA 
AATTGA 

 

Protein sequence

MPIDKALELA YSQKLDLILV APNAKPPVAK IMDYGKYKYE LSKKEKKAKK NQKIIEVKQM 
KFRIKIDEHD YQTKVKHIKR FIESGNKVRV VIMFRGRELA FADKGKEILD RIKEDLRDIA 
VVEKQPKLEG RDMWMMLKPK N