| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0919 |
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| Symbol | |
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| ID | 5297961 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | + |
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| Start bp | 956219 |
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| End bp | 957100 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 640769198 |
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| Product | RluA family pseudouridine synthase |
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| Protein accession | YP_001306165 |
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| Protein GI | 150020811 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.976861 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAGTTA ACGAAAACAA TTACTATTCA AGACTAGATA AATTTCTTAG AAAACAACTT
CAAAATATGC CTTTAAGTGC TATATATAAG ATTATAAGAA AAGGAAAGGT TCTAGTTAAT
GGAAAGAGAG TAAAAGAACC ATCTTTTAGA TTGGAGATAG GTGATGAAAT AGAAATTAAA
GAAGAAACTA CAAAATATAA CAGGGAAAAG AATAATCAAA TAATTCCCAT AAAGATGGAT
TTTGAAATTC TGTATGAAGA TGAAAATTTG TTGATAATTA ATAAACCTGC GGGTATACCT
ATACATCCGG GAAAAGGAAC GCATATAGCC ACATTGATTG AAGGATTAAT GTACTATGGA
AAAGAGCATA ACTTTACACC TTACCTTGTT CATAGATTGG ATAAGCATAC CTCAGGGGTT
TTTGTTGTAG CAAAGAACGT TAATACTGCA AGAGAATTAA ATGAAATAAT TTCTTCCAGA
GCAGTTGAAA AGGTATACAC TACTTTATGT GTGGGGGAAA TGAAAAAAAG TGAAGTAATT
AAAATTCCAC TTGATGGAAA AAATGCAGTT ACAATATATG AAAAGCAAAA ACAATTTAAA
AGTGGTTTGG GGTATTTTTC TTTACTTAGG GTGCAGATAA AAACAGGAAG AAAACATCAA
ATAAGAAAAC ATTTGAGTTT AATAGGTCAT CCAGTTATAG GTGATGATCT ATATGGAGAT
AAAAAATTAA ACAGAAAGTT TAAGCAAAAA TACGCTTTAA AAAGATATTT TTTACACTGC
AGTATGATGT TACTTTACTA CAATGATAAA GAAATCAGGA TCAATGCTCC GCTGCCAAAC
GATTTAAAAG ACGTATTGAA AAATTTGAAA ATGGAGGAAT AG
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| Protein sequence | MIVNENNYYS RLDKFLRKQL QNMPLSAIYK IIRKGKVLVN GKRVKEPSFR LEIGDEIEIK
EETTKYNREK NNQIIPIKMD FEILYEDENL LIINKPAGIP IHPGKGTHIA TLIEGLMYYG
KEHNFTPYLV HRLDKHTSGV FVVAKNVNTA RELNEIISSR AVEKVYTTLC VGEMKKSEVI
KIPLDGKNAV TIYEKQKQFK SGLGYFSLLR VQIKTGRKHQ IRKHLSLIGH PVIGDDLYGD
KKLNRKFKQK YALKRYFLHC SMMLLYYNDK EIRINAPLPN DLKDVLKNLK MEE
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