Gene Tmel_0911 details

Gene Information

• Locus tag: Tmel_0911
• ID: 5297659
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermosipho melanesiensis BI429
• Kingdom: Bacteria
• Replicon accession: NC_009616
• Strand: +
• Start bp: 949037
• End bp: 949606
• Gene Length: 570 bp
• Protein Length: 189 aa
• Translation table: 11
• GC content: 29%
• IMG OID: 640769190
• Product: Holliday junction DNA helicase RuvA
• Protein accession: YP_001306157
• Protein GI: 150020803
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0632] Holliday junction resolvasome, DNA-binding subunit
• TIGRFAM ID: [TIGR00084] Holliday junction DNA helicase, RuvA subunit

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGATCTATG CAATGTATGG TGTATTGGAA GACATCGAAA ATGGAAAATT GTATTTAAAT 
GTGAATGAAA TTGTATATGA GATAGTAGTT GGCGATACAG GTTATTTCGA AGATTTTTTG 
AATGAAAAAA TAAAAGTATT TACAAAGATG ATTGTAAATG ACGATGAAAT AAGTTTATAC 
GGTTTTTCAG ATGTTTTGAA ACTAAAGTTA TTTGAGAAAC TTATTTTGGT TAACAAACTA 
GGCCCAAAGA GTGCTCTAAA AATAATTACT TCAAGTGATG TTTCATATAT TGTAAGTGCT 
ATTGTAAATG AAGATGTTAA AACATTATCT ACACTTCCAG GAATAGGTCC AAAAACAGCA 
GAAAGGATTA TATTAGAACT AAAAGATTCT ATGAAAGAAT TTGATGTAAC TTTAACGGAA 
AAGGATAAAA AGATTTTAGA GGCAATAGAA GCATTAGTTA CGCTGGGATT TAGCAGAAAT 
CAATCGAAAA AAGCTGTCAC TCAAATTTTA AAAAAGGATG ACAGTTTAGA TGATATAATT 
AAAAAGGCTT TGAAATTTTT AAGCAGGTGA 

 

Protein sequence

MIYAMYGVLE DIENGKLYLN VNEIVYEIVV GDTGYFEDFL NEKIKVFTKM IVNDDEISLY 
GFSDVLKLKL FEKLILVNKL GPKSALKIIT SSDVSYIVSA IVNEDVKTLS TLPGIGPKTA 
ERIILELKDS MKEFDVTLTE KDKKILEAIE ALVTLGFSRN QSKKAVTQIL KKDDSLDDII 
KKALKFLSR