Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_0910 |
Symbol | |
ID | 5297658 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | + |
Start bp | 948285 |
End bp | 949040 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 640769189 |
Product | TatD family hydrolase |
Protein accession | YP_001306156 |
Protein GI | 150020802 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0084] Mg-dependent DNase |
TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAGTAG ATACACATGC ACATCTTCAT ATGAAACATT TTAATAAAGA TAGAGAAGAA GTAATTAAAA AATTTAAAGA TGATGGAATT TTGTTTGTTG TTAACGTTGC TACTAACCTA AAAGATAGTG TGTCTTGTAT AGAGCTTGCA AGAAAGTATA ATAAAATATA TGCAACTGTT GGAGTTCATC CCCACGATAG TAAAGATGTA CCAAAAAAAT ATTTAGAGAA GTTAAATAAT CTCGCACAAA ATTTCAAAGT AGTTGCAATT GGTGAAATAG GTTTAGATTA TTATAGAAAC ATTTCACCAG TGGAAGTTCA ACAAAAGGTG TTTACAGAAC AATTGATACT TGCCAAAGAA TTAGATTTAC CTGTAATTGT GCATATAAGA GATGCTTATG AAGATGCATA TAATATTATT GAGATGATTG GCCATTTTAA GGGAGTTATT CACGCATTTA GTGGTGATAA AGAATATGCG TTAAAGTTTG TGAAATTGGG CTTTATGCTT GGAATAGGGG GTCCTGTTAC ATATAAAAAG AACGAAAATC TCAGAAATGT GGTCAGATTA GTAGGAGAGG AAAATATAGT AACGGAAACT GATTGCCCAT ACCTTCCGCC ACAACCATTT AGAGGTAAGA GAAATGAGCC TTCATATGTA AAATACGTAG TGGAAGAGAT AAATAGGATT TTAGATAATG ATGTAGCGGA AACATTAGTG AAAAATGCGG CAGAACTATT TGAGGTGAAA TTGTGA
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Protein sequence | MIVDTHAHLH MKHFNKDREE VIKKFKDDGI LFVVNVATNL KDSVSCIELA RKYNKIYATV GVHPHDSKDV PKKYLEKLNN LAQNFKVVAI GEIGLDYYRN ISPVEVQQKV FTEQLILAKE LDLPVIVHIR DAYEDAYNII EMIGHFKGVI HAFSGDKEYA LKFVKLGFML GIGGPVTYKK NENLRNVVRL VGEENIVTET DCPYLPPQPF RGKRNEPSYV KYVVEEINRI LDNDVAETLV KNAAELFEVK L
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