| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0909 |
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| Symbol | |
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| ID | 5297206 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | + |
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| Start bp | 946027 |
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| End bp | 948213 |
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| Gene Length | 2187 bp |
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| Protein Length | 728 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 640769188 |
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| Product | cobalamin B12-binding domain-containing protein |
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| Protein accession | YP_001306155 |
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| Protein GI | 150020801 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5012] Predicted cobalamin binding protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTGATC CCAAGAAACC AATAGATATA GATGAAATTT TAAAAGATTT GGATAAATAT
AGGCCAAAGA GAAAAGGTTG GACTTGGCGA AAAAGATTGC CGGAAGAAAC AAAAATAGGT
GATTACAAAT ATTATCAAGT AAGTGAAGAT TTGAAGAATT CCATACCACT TCCAGCGGCC
CATTATTTCG GTGGCATAGA TCCACAACCA GAGGTTGTTA TAACTTCTGA AATAGCATCT
GGGAGATTTG AAGATGATAT AAGAAGGATG AGAATGGCAG CATGGCATGG TGCAGATCAC
ATAATGGTTA TAAGAACTTT GGGGCAATCA CATTACGATG GGCTAATTGA GGGTACACCT
GAGGGAATAG GTGGTATACC AATTACCAGA AAACAACTCC GTGCAACAAG AAAGGCTTTG
GATTTAATAG AAGAAGAAGT AGGAAGGCCA ATAAATTTTC ATAGTTATGT TTCTGGAGTT
GCAGGTCCTG AAATTGCAGT TTTGTTTGCA GAAGAAGGGG TAAATGGTGC ACACCAAGAC
CCACAATACA ATGTTTTGTA TAGAGGTATC AATCCAATAC GTTCATTTGT CGATGCCGCT
GTTGCGAAAA AGATTATGGC ATCTGTAAAT ATGTTACAGA TAGATGGGGC TCATAACGCC
AATGCATCTG CAAAGTTAGC ATGGACGGTA ATGCCAGAAC TTTTGGTACA ACACGGTATT
AATTGTATGT ATTCATTAAA AGCAGGAATG AAGAAAGAGT ATATAGCACT TTCCACAGTT
CCACCAGTTG TTGCACCAAT GCCTGAATTT AGATATAACC TACCGTATGC AGTTGCTTTG
AGAGAATTGT TCGATGGATT TAGATTTAGG GCACAAATGA ATACAAGATA TATCGAGTCA
GATTTATTCG ATGCTACAAG AATACACGTT CTCAACACGT TGATTTCACG ACTAACATCT
GCAGATTTGC AATCGACAAT TACTCCTGAC GAAGGAAGAA ATGTACCATG GCATGTAAAT
TCCATACGTG GTGTTGAAAC TGCAAAACAC ACATTAGTTG CACTAGATGG AATGAAAAGA
TATGTGAAGA TAGACGAAAA AGAAATTGGG TTAAAAGTAA GAGAATTGAA AATGAGAGCA
ATTTTAATGC TTGAAGAAAT ATTAGATATA GGTGGTTATT TTGAGGCGTT GGAAGCGGGA
ATGTTTGTTG ATAATGGTTA TTATCCCGAG AGAATAGGTG ATGGAATTGC AAGGAAAAAG
AATGGTGAAA TAGCAGCGGG AACAGTTGTT CCTAGAGATG AAGATTACAT GGCACCAGTG
TGTGAGCATT TTGGATATAA TAATTTGCCT GAGGGAATTG AAAAACCTTG CGATTTGATA
GGAGGCTGTA CATTACACAA TCCAGATAAA ATACAGTTTA TAGACGAATT GGATGAAAGT
GATAACGTAA ATATTAGGCT GGAAAAGATA AGAGATATGA GAAAAAGAAA TGTTATAAAA
CCAGAAGTAG AATGGTTCTC GGATGGATGG ATCCAAATGG ATATGACGTT TGCGCTCCCA
GAAGAGTTGG CTGAGGCAGC CGCAATAGCT TTATGTCAAA AGTTAGGTCT TGAAGAGCCT
ACGGTAATTC ACAAAACAAT ACTTCATCCA TCGGAAGGAA CGTATATAGA AGTTAAAGCA
AAGGTACCTT TTGAAATAGA GATAGACAAA TTAGAACTTC CAAAGAAACC TGAAACATTA
CCCGAAGAGG AAATATTTGA GTTTATCCAA AAAAATCCGA TACACGTAGT TGCAGGAACA
GTAGGGAATG ATGAACATTC AGTTGGATTA AGAGAAGTAT TGGATATAAA ACATGGTGGT
ATTGAAAAGT ATGGGATAAA ATACACATAC CTTGGAACAA GTGTTCCACC TGAAAAACTT
ATTGATGCAG CTATTGAAAC AGGTGCAAAG GTAATTCTTG CATCTATGAT AATTACACAC
AATGATGTTC ATATTCAGAA TATGAAAAAA TTGCATGAAC TTGCAATTGA AAAAGGAATA
AGAGATAAGG TATTGATTAT AGCAGGTGGT ACTCAAATTA ATAATGACCT TGCTGTTGAA
AATGGTATGG ATGCAGGGTT TGGACGTGGA ACTAAAGGAA TTCATGTTGC CTCGTTTATA
GTCAAAAAAT TAAAAGAAAA AAAATAA
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| Protein sequence | MLDPKKPIDI DEILKDLDKY RPKRKGWTWR KRLPEETKIG DYKYYQVSED LKNSIPLPAA
HYFGGIDPQP EVVITSEIAS GRFEDDIRRM RMAAWHGADH IMVIRTLGQS HYDGLIEGTP
EGIGGIPITR KQLRATRKAL DLIEEEVGRP INFHSYVSGV AGPEIAVLFA EEGVNGAHQD
PQYNVLYRGI NPIRSFVDAA VAKKIMASVN MLQIDGAHNA NASAKLAWTV MPELLVQHGI
NCMYSLKAGM KKEYIALSTV PPVVAPMPEF RYNLPYAVAL RELFDGFRFR AQMNTRYIES
DLFDATRIHV LNTLISRLTS ADLQSTITPD EGRNVPWHVN SIRGVETAKH TLVALDGMKR
YVKIDEKEIG LKVRELKMRA ILMLEEILDI GGYFEALEAG MFVDNGYYPE RIGDGIARKK
NGEIAAGTVV PRDEDYMAPV CEHFGYNNLP EGIEKPCDLI GGCTLHNPDK IQFIDELDES
DNVNIRLEKI RDMRKRNVIK PEVEWFSDGW IQMDMTFALP EELAEAAAIA LCQKLGLEEP
TVIHKTILHP SEGTYIEVKA KVPFEIEIDK LELPKKPETL PEEEIFEFIQ KNPIHVVAGT
VGNDEHSVGL REVLDIKHGG IEKYGIKYTY LGTSVPPEKL IDAAIETGAK VILASMIITH
NDVHIQNMKK LHELAIEKGI RDKVLIIAGG TQINNDLAVE NGMDAGFGRG TKGIHVASFI
VKKLKEKK
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