Gene Tmel_0900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_0900 
Symbol 
ID5297974 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp937000 
End bp937590 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content27% 
IMG OID640769179 
ProductHAD family hydrolase 
Protein accessionYP_001306146 
Protein GI150020792 
COG category[R] General function prediction only 
COG ID[COG1011] Predicted hydrolase (HAD superfamily) 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTAGAA ATATCATCTT TGATTTAGGA AGAGTACTTA TAAATTGGGC CCCCAAAAAA 
TACATGGAAA AAGTGTTTGA CAAAGATACC GTAACATTCT TTATGAACAA TATCTTTAAC
ACAAACGATT GGAACTTAAT GGACAAAGGT TTAATAGATG AAGAAGAGTT ATGGAAGAAA
AAATTATCCA CATTCCCCCA ATATAAAGAA GAAATTGAGC ATATGAAAAA CAAAGTCATT
GATCTTCTTA CACCAATAGA AGAAAATGTA AATATACTCT ACGAACTTAA AAAGAAATAC
AAACTCTACG TACTTTCAAA TTTTAGTAAA AATTCATTTA AGATGGTAAA AGAAAAATAC
AAATTCTTCG AATTATTTAA CGGAATAGTC ATTTCAAGTT ATGTAAATTC CATTAAACCA
GAGGAAAAAA TATATAAAAT ACTTATCAAA ACATACAACA TAATTCCTGA GGAAAGCCTC
TATATAGATG ACAAAATAGA GAATATATCC ACTGGAAAAA GGTTGGGATT TAAAACAATA
CATTTAAAAA GTCCAGAGCT CCTTAAAAAC AAATTAAAAA AATATATCTA A
 
Protein sequence
MVRNIIFDLG RVLINWAPKK YMEKVFDKDT VTFFMNNIFN TNDWNLMDKG LIDEEELWKK 
KLSTFPQYKE EIEHMKNKVI DLLTPIEENV NILYELKKKY KLYVLSNFSK NSFKMVKEKY
KFFELFNGIV ISSYVNSIKP EEKIYKILIK TYNIIPEESL YIDDKIENIS TGKRLGFKTI
HLKSPELLKN KLKKYI