Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_0900 |
Symbol | |
ID | 5297974 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | - |
Start bp | 937000 |
End bp | 937590 |
Gene Length | 591 bp |
Protein Length | 196 aa |
Translation table | 11 |
GC content | 27% |
IMG OID | 640769179 |
Product | HAD family hydrolase |
Protein accession | YP_001306146 |
Protein GI | 150020792 |
COG category | [R] General function prediction only |
COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTTAGAA ATATCATCTT TGATTTAGGA AGAGTACTTA TAAATTGGGC CCCCAAAAAA TACATGGAAA AAGTGTTTGA CAAAGATACC GTAACATTCT TTATGAACAA TATCTTTAAC ACAAACGATT GGAACTTAAT GGACAAAGGT TTAATAGATG AAGAAGAGTT ATGGAAGAAA AAATTATCCA CATTCCCCCA ATATAAAGAA GAAATTGAGC ATATGAAAAA CAAAGTCATT GATCTTCTTA CACCAATAGA AGAAAATGTA AATATACTCT ACGAACTTAA AAAGAAATAC AAACTCTACG TACTTTCAAA TTTTAGTAAA AATTCATTTA AGATGGTAAA AGAAAAATAC AAATTCTTCG AATTATTTAA CGGAATAGTC ATTTCAAGTT ATGTAAATTC CATTAAACCA GAGGAAAAAA TATATAAAAT ACTTATCAAA ACATACAACA TAATTCCTGA GGAAAGCCTC TATATAGATG ACAAAATAGA GAATATATCC ACTGGAAAAA GGTTGGGATT TAAAACAATA CATTTAAAAA GTCCAGAGCT CCTTAAAAAC AAATTAAAAA AATATATCTA A
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Protein sequence | MVRNIIFDLG RVLINWAPKK YMEKVFDKDT VTFFMNNIFN TNDWNLMDKG LIDEEELWKK KLSTFPQYKE EIEHMKNKVI DLLTPIEENV NILYELKKKY KLYVLSNFSK NSFKMVKEKY KFFELFNGIV ISSYVNSIKP EEKIYKILIK TYNIIPEESL YIDDKIENIS TGKRLGFKTI HLKSPELLKN KLKKYI
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