| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0878 |
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| Symbol | |
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| ID | 5298175 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 912634 |
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| End bp | 913533 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 640769156 |
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| Product | ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein |
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| Protein accession | YP_001306124 |
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| Protein GI | 150020770 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00683705 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAAAA TCACTTTAAT TCTTCTTCTA TTTTCAGTTA TACATTTTTC ACTCACTTTG
TTAAATCCAT TTGGCCCCAC CATATTCCCT GTTGCTCCAA TAATCGGTGA AAAAGTAAAA
GGTGATGTAG ATATTTCTGT AGAATTTTGG AAAAATTTAG ATGATGTGAT TGCTAAAGTT
GCCACTAGTT ATGCAAAATT TGTAGTCTTA CCAATAACTA CCGCTGCAAA TTTATATGCC
AAAGGAGTAG ATATAAAACT AATTGGTGTT CACGAATGGA AAGTGTTTTA TCTCGTTGCA
AATACCGAAT ACACGGACCT AACATCTCTA AAGGGGCAAA CTGTTTACTC TGCTCATGGA
AGAGGCCAAA CAGTAGATGT TTTATTAAGA TATCTACTAA CCAAAGAAGG TTTAAAACCT
GATGTTGACG TAAAGTTTGC TTATGCTCCT CCTCAAGAAA TAGTTGCACT CTTTAAATCT
GGGAAAATCC ACTTTGCGGC TTTACCAGAA CCATTTGTAA CTATGTGTTT GGGAAACGGA
AAAATAGTAC TTGATTTTCA AAATGTTTGG AATAATATCT CAGGTTCAAA ATTTGGTATA
CCTATTGCAG GATTATTCGT AATTGGAAAT ATTTCAAACT ACAAAAATAC AATTAACGAA
GTAGAAAACA TATTTAAAAG TAGCGTAGAA TATGCAAACT CACATATCGA TGAAAGCCTT
GCAATTACAA GCAAATATTT TCCTATTCCC GTGCCTGTAT TAAAAAAATC ACTCGAAAGA
ACGGAATTTA AATACATAAA AAATTGCAAA GAAGAAGTGG ATTTATTCTT AAGAACAATG
CATAAATTAT ACGAAGAAGG TATTCCAAAA GTACCAGATG AAGGGTTTTA TCTAAAATGA
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| Protein sequence | MKKITLILLL FSVIHFSLTL LNPFGPTIFP VAPIIGEKVK GDVDISVEFW KNLDDVIAKV
ATSYAKFVVL PITTAANLYA KGVDIKLIGV HEWKVFYLVA NTEYTDLTSL KGQTVYSAHG
RGQTVDVLLR YLLTKEGLKP DVDVKFAYAP PQEIVALFKS GKIHFAALPE PFVTMCLGNG
KIVLDFQNVW NNISGSKFGI PIAGLFVIGN ISNYKNTINE VENIFKSSVE YANSHIDESL
AITSKYFPIP VPVLKKSLER TEFKYIKNCK EEVDLFLRTM HKLYEEGIPK VPDEGFYLK
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