Gene Tmel_0873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_0873 
Symbol 
ID5298170 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp907615 
End bp908580 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content27% 
IMG OID640769151 
Producthypothetical protein 
Protein accessionYP_001306119 
Protein GI150020765 
COG category[S] Function unknown 
COG ID[COG0392] Predicted integral membrane protein 
TIGRFAM ID[TIGR00374] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGT TTTTGAGAAA TGCTGTTATT GCAGTTTCAA TAAGTTTAGC AATAATTGTA 
ATTATGCAGT TTTTTCAGGG GGATCTTTCC AATTTTTTTA AAATACCGAA ATATGTTTTC
ATAACAACAT TTTTAGGATA TGTATTAATG TATTTTATTG GTGGATTATA TACAAAAATA
TTTTTGAAAT TTTTGGGCTA TGAAGTTAGA TTTCTAAGTG CTTTTGAAAA TTATTTTTTT
GGAAATTTCT TTTCCTATAT TACACCTCTT TATATAGGTG GACAACCTTT TCAAGTATAC
CATCTTTCTA AATTAGGAGT TAAAAGTGAG GATGCTACTA ATATGGTTAT GACTAGACTT
TTTGAAACAT TTTTTGTTAC TCTTGTTTTA GATATTTGGA TTTTTTCGTA TGCTTTCAAA
AATTTAGATT TTTCAAATTT AGGTAAGGGA TTAATAATTG TTGGGTTTGT TTCTCAAGTT
GGATTAGTAA TTTTAATATT GACATTTATG TTTTTTCCAA AGTTATTTAA AATTGCCATG
GTACCTGTAT TTAAACTTTT TAAGTTTGAT TTGAATAAAT TGGAAAATTG GTTGTCAAAT
TTAAAAAAGA GTGTAAATAA CGTTTGGAAG AAAGATTTTT ATATAATTTT AATTGATACT
GCTTTTTGGT TTCTTATGGT ATGTTTGCAT GTTGTTCCAT ATTATCTGAT TTTCAGGCAT
TTTTCACATT TTAATATATC ATTTTTTAGA CTTGTTGGAG TATTGAGTTT ACTTAATAGT
ATAGCATATT ATGCTCCGAC ACCTGGGGCT GCAGGTGGAA TTGAGGGAGT TTATCAAATT
TCATTGAGTG GAATTATCAG ACCTTCTGTA ATTTCGAGTG CTATCTTTTT GTGGAGACTT
TTTAGCTATT ATATTCCGAT ATGTTTTGGA TTGCTTTTTA TTTGGAGGGT AAAAGATTGG
CAGTAG
 
Protein sequence
MKKFLRNAVI AVSISLAIIV IMQFFQGDLS NFFKIPKYVF ITTFLGYVLM YFIGGLYTKI 
FLKFLGYEVR FLSAFENYFF GNFFSYITPL YIGGQPFQVY HLSKLGVKSE DATNMVMTRL
FETFFVTLVL DIWIFSYAFK NLDFSNLGKG LIIVGFVSQV GLVILILTFM FFPKLFKIAM
VPVFKLFKFD LNKLENWLSN LKKSVNNVWK KDFYIILIDT AFWFLMVCLH VVPYYLIFRH
FSHFNISFFR LVGVLSLLNS IAYYAPTPGA AGGIEGVYQI SLSGIIRPSV ISSAIFLWRL
FSYYIPICFG LLFIWRVKDW Q