Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_0873 |
Symbol | |
ID | 5298170 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | + |
Start bp | 907615 |
End bp | 908580 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 27% |
IMG OID | 640769151 |
Product | hypothetical protein |
Protein accession | YP_001306119 |
Protein GI | 150020765 |
COG category | [S] Function unknown |
COG ID | [COG0392] Predicted integral membrane protein |
TIGRFAM ID | [TIGR00374] conserved hypothetical protein |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAGT TTTTGAGAAA TGCTGTTATT GCAGTTTCAA TAAGTTTAGC AATAATTGTA ATTATGCAGT TTTTTCAGGG GGATCTTTCC AATTTTTTTA AAATACCGAA ATATGTTTTC ATAACAACAT TTTTAGGATA TGTATTAATG TATTTTATTG GTGGATTATA TACAAAAATA TTTTTGAAAT TTTTGGGCTA TGAAGTTAGA TTTCTAAGTG CTTTTGAAAA TTATTTTTTT GGAAATTTCT TTTCCTATAT TACACCTCTT TATATAGGTG GACAACCTTT TCAAGTATAC CATCTTTCTA AATTAGGAGT TAAAAGTGAG GATGCTACTA ATATGGTTAT GACTAGACTT TTTGAAACAT TTTTTGTTAC TCTTGTTTTA GATATTTGGA TTTTTTCGTA TGCTTTCAAA AATTTAGATT TTTCAAATTT AGGTAAGGGA TTAATAATTG TTGGGTTTGT TTCTCAAGTT GGATTAGTAA TTTTAATATT GACATTTATG TTTTTTCCAA AGTTATTTAA AATTGCCATG GTACCTGTAT TTAAACTTTT TAAGTTTGAT TTGAATAAAT TGGAAAATTG GTTGTCAAAT TTAAAAAAGA GTGTAAATAA CGTTTGGAAG AAAGATTTTT ATATAATTTT AATTGATACT GCTTTTTGGT TTCTTATGGT ATGTTTGCAT GTTGTTCCAT ATTATCTGAT TTTCAGGCAT TTTTCACATT TTAATATATC ATTTTTTAGA CTTGTTGGAG TATTGAGTTT ACTTAATAGT ATAGCATATT ATGCTCCGAC ACCTGGGGCT GCAGGTGGAA TTGAGGGAGT TTATCAAATT TCATTGAGTG GAATTATCAG ACCTTCTGTA ATTTCGAGTG CTATCTTTTT GTGGAGACTT TTTAGCTATT ATATTCCGAT ATGTTTTGGA TTGCTTTTTA TTTGGAGGGT AAAAGATTGG CAGTAG
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Protein sequence | MKKFLRNAVI AVSISLAIIV IMQFFQGDLS NFFKIPKYVF ITTFLGYVLM YFIGGLYTKI FLKFLGYEVR FLSAFENYFF GNFFSYITPL YIGGQPFQVY HLSKLGVKSE DATNMVMTRL FETFFVTLVL DIWIFSYAFK NLDFSNLGKG LIIVGFVSQV GLVILILTFM FFPKLFKIAM VPVFKLFKFD LNKLENWLSN LKKSVNNVWK KDFYIILIDT AFWFLMVCLH VVPYYLIFRH FSHFNISFFR LVGVLSLLNS IAYYAPTPGA AGGIEGVYQI SLSGIIRPSV ISSAIFLWRL FSYYIPICFG LLFIWRVKDW Q
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