| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0867 |
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| Symbol | |
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| ID | 5298439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 902864 |
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| End bp | 903556 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 640769145 |
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| Product | RNA-binding S4 domain-containing protein |
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| Protein accession | YP_001306113 |
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| Protein GI | 150020759 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGACTAG ATAAATTCCT ATCAAATGCA AAGGTGGGTT CTAGAAAAGA AGTTAAAAGG
CTTATAAAGT TTGGGATTGT AAAGATCAAT GGAGAAATAA TAACAAATGT GGATTTTAAA
GTAAAAGAAA ATGATATTGT AACAGTAAAT AACACACCCA TTACCCCCTA TCATAACGTT
TATATAATTT TTAACAAACC TACAGGATAT ACTTCTAGTA AATCTGAATT TGAAAGAAAT
ATATTTGAAT TTATTGACCA TCCTTACGTC GAAAATCTCC ATATTGCAGG AAGACTAGAT
AAAGATGTGG AGGGGTTGTT ATTAATTACA AACGATGGAA TATTTACACA TAAAATAACC
TCCCCAAAAA GCAAAATAGA AAAAGAATAC ATAGTAAAAG TTGACAAAGA AATATCAGAT
GAAATGATAC AAAAAGCAAA AGATGGTATA GTTTTAAAAA ATGGAACACG CTTTAAACCT
GCTATAATAA AGAGATTAAA AGACAACTTT ATCTCCATAA CAATTACGGA AGGAAAATAT
CATGAGATAA AATTAATAGT TAAATTCCTT GGCCTTTCCT ACAAAAAAAT CGAAAGAATA
CGCATAGGTA AATTAAAACT CGAAGATTTC AATTTAAAGA GAGGTGAATG GTCGGAAATT
GATTATAAAA CAGCCTTAAA AGCCCTTGAA TAG
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| Protein sequence | MRLDKFLSNA KVGSRKEVKR LIKFGIVKIN GEIITNVDFK VKENDIVTVN NTPITPYHNV
YIIFNKPTGY TSSKSEFERN IFEFIDHPYV ENLHIAGRLD KDVEGLLLIT NDGIFTHKIT
SPKSKIEKEY IVKVDKEISD EMIQKAKDGI VLKNGTRFKP AIIKRLKDNF ISITITEGKY
HEIKLIVKFL GLSYKKIERI RIGKLKLEDF NLKRGEWSEI DYKTALKALE
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