Gene Tmel_0864 details

Gene Information

• Locus tag: Tmel_0864
• ID: 5298436
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermosipho melanesiensis BI429
• Kingdom: Bacteria
• Replicon accession: NC_009616
• Strand: -
• Start bp: 900231
• End bp: 900896
• Gene Length: 666 bp
• Protein Length: 221 aa
• Translation table: 11
• GC content: 23%
• IMG OID: 640769142
• Product: SARP family transcriptional regulator
• Protein accession: YP_001306110
• Protein GI: 150020756

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.614724
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAAA AAATTGATAT AAAACCAACA AAGTATCTAA AAATTTTTCT CTATATAATA 
TTAAGTAACA AAGAAGCTAT TTCAAAAGAA GAAATATATA AAGTATTTTG GGGGGAAAAT 
GCACGAAAAA ACCTAAATGT ACAAATATAT TCTTTAAAAA AAAGTCTCCC TTTAGGTGAT 
GTTTTACAAA ATCACAGAGA TTTTATAACT ATAAATAAAA ATGCTATAAA ATCGGATTAT 
TATGAATTTT TTAAATACAT AGGAAAAAAT CCAAAAAAAA TTGAAAAAAT TTACAGAGGA 
GAACTTCTGG AAAATTTTTC AGATAAATGG ATTATAGAAA AAAGAAACTT GTGTCAAAAA 
CTATTTAAGT TACAAATTGA AAAATTCAAG AATTTATTTA ACAAGATTTC ATTCCTCATT 
GAACAAATTT CAAAAATGAG AAGTAAACCT TATATAATAC TTTTTACTCC AAACATCAAA 
AAAACATCTC TAAGAAAAGG CGACATGGTA CTAAATTTAC ACAAAGGACA TCTATTAATT 
ATAGAAAACA ATAATAACAA CCCAGAATAC GTAATAAAAG GTTTTACAAA ACGAGTGAAT 
CTTAAAAACT TCAAAATCTT AAATGAATAC GAAGCATTAA AACTCATTAA AAAGGAGGAA 
GCATAA 

 

Protein sequence

MKKKIDIKPT KYLKIFLYII LSNKEAISKE EIYKVFWGEN ARKNLNVQIY SLKKSLPLGD 
VLQNHRDFIT INKNAIKSDY YEFFKYIGKN PKKIEKIYRG ELLENFSDKW IIEKRNLCQK 
LFKLQIEKFK NLFNKISFLI EQISKMRSKP YIILFTPNIK KTSLRKGDMV LNLHKGHLLI 
IENNNNNPEY VIKGFTKRVN LKNFKILNEY EALKLIKKEE A