| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0853 |
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| Symbol | |
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| ID | 5298282 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 889800 |
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| End bp | 891275 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 640769130 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001306099 |
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| Protein GI | 150020745 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTAAAT TTTACCTAAA ATACTTTTTA ATAGCTCTTT TAATCTTTTT TGGTATTTTA
ACCTTGTTTT ATATATTACA TCCTAAAGGA CTAGTTATTG AAAACGTCGG AAAAAAGCTA
CCATATATAA CCCGACTTTC TTCTCCACAA ACCGCCTCTT TTACAATAAA TATTTCCAAA
AACTTTGATT ATCTATACCT TCACTACATA GAAACAGCTT CTTTTTCAAT AAAAGCTAAC
GAAACAATTA TTTATAAATA TGGTTTAAAA AACTCTGGAC ATACGTGGTT TCCCCCGTTC
TTAATACCTT TACCAAAAAA CACCAATACC TTAACTATTG AGCTTTTTGG AATGTATTCA
ATGGGTTTAG GAAAAATTTA CTTTGTAAAA GAAAATGAAG TATGGAAATA CTCCATTTTA
AAATTTTTAA CGGATAATTT TGTAAACATT TCCATTGGTC TCATCTTAAC TTTAGGCTTT
CTTCTATATT TACTCTCCAG AAATACAGAC ATAGAAAAGC AGAAAGCTTA TCTGTTTTTT
TCATATTCAA GTTTTCTTGC AACCGTTTGG CTTTTTGATG TGTTAAGTTT GGAGTATCTA
TATTATCCAA TAAGAGGGGC TTTGGTTGCG AGTGCATATT TTTCTTTTTA CTTTTTACTC
ATTGGTATAG ATTTATATAA CTTTTCTGAA CTTAAAAAAA GCACAAAAAT ACTATCGTTT
TTCAATATAG CTGTTGGCAT ACTCTTACTG CTTACATTTT CACCACATTT GTTAAAACTA
TTTTCAACCT TAGTCTCCCC ATTATTAATT GTAAACGCTA TATTTGTACT ATACAAAATA
ATAAAATCAT ATATTCCACA AAACATCGTA TTTGCTACTT TTTTTGCAAT AACAATAATC
TTTGATGGTT TCGTGCTGAT GTTTAACCTT CCATTACGTT TTCTTTCTCC ATACGGAATA
ATCGCAATAT TCATGAGTTT TTCATCTAGT ATAATAATGG AATATAAAGA GAAAGTCCAC
GAATTAAACA TAACTTATGC AAGAAGTTTA ATTGATCCCC TAACAGGTGC ATATAACAGA
GGAATTCTAA GGAATTTATC ACCTAACGAG AATGATATTT TAATCTTTAT AGATATTAAC
AAATTCAAAT ATATAAACGA TACATATGGA CATGAAAAAG GAGATGAACT ATTAAAAAAA
TTATCTAGCA TCGTTAAATC TACATTAAAC TCTTCAAATC TTTTTATACG AATGGGAGGA
GATGAATTTT TAATCATCCT TAAAAACTCC ACAAAAAAGG AAGCCGAACA AACTATACAA
AAAATACACG AAGAATTTAA AAATTCCTTC GAGTTTAAAC CAACTTTTTC TTGGGGAATT
TCGACTGTAA AAAGCTCTAT AGAAAATTCT ATAAGAATAG CTGACAATTT AATGTACAAA
ATGAAAGGAA AAAATAAAAA ATCACATATG ATATAA
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| Protein sequence | MLKFYLKYFL IALLIFFGIL TLFYILHPKG LVIENVGKKL PYITRLSSPQ TASFTINISK
NFDYLYLHYI ETASFSIKAN ETIIYKYGLK NSGHTWFPPF LIPLPKNTNT LTIELFGMYS
MGLGKIYFVK ENEVWKYSIL KFLTDNFVNI SIGLILTLGF LLYLLSRNTD IEKQKAYLFF
SYSSFLATVW LFDVLSLEYL YYPIRGALVA SAYFSFYFLL IGIDLYNFSE LKKSTKILSF
FNIAVGILLL LTFSPHLLKL FSTLVSPLLI VNAIFVLYKI IKSYIPQNIV FATFFAITII
FDGFVLMFNL PLRFLSPYGI IAIFMSFSSS IIMEYKEKVH ELNITYARSL IDPLTGAYNR
GILRNLSPNE NDILIFIDIN KFKYINDTYG HEKGDELLKK LSSIVKSTLN SSNLFIRMGG
DEFLIILKNS TKKEAEQTIQ KIHEEFKNSF EFKPTFSWGI STVKSSIENS IRIADNLMYK
MKGKNKKSHM I
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