| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0850 |
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| Symbol | |
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| ID | 5298000 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 885865 |
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| End bp | 886629 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 640769127 |
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| Product | flagellar biosynthetic protein FliR |
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| Protein accession | YP_001306096 |
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| Protein GI | 150020742 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
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| TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACTAT TTGACTTTGT AGAAACACAA TTTCTCAACT GGGGAATGCT TATTAGTAGA
ATCACTGGAA TGTTCATAAT AACACCTTTA CTGTCTGGGA GGTTTATACC CACGACAGTA
AAGGTTTTTC TTGTTCTTTC TCTTTCATAC ATGATGTTAC CACAAACAAA TAGCATACCA
CTAAACACTC CTGTAATACA CATTGTTTTA TCACTCACTA ACAACTTTAT CGTAGGTTTT
GCCATGGGGC TTATGGCATT CATGATACTT GGTGCTTTCT CCATTGCAGG TGAATTACTT
GGAGTAGAAT CTGGTTTTGG ACTTGCAACA TCTATGGATC CAACTATGGA AGAATCGCCA
ATTATAGGAC AATTTGTATT TTTACTTGCT ATCTTTGTCT TCATCTCTTT AAATGGTCAT
TTGGTAGTTT ATGAAGCTAT CTTAGATTCT ATAAAAATCT TTCCACTTGA TTTAGATTTC
TTAGATTTTA ATTTCACAAA ATTTATTACC ACAAAATTTG TTGAAATGTT TTTCATTGCA
TTGAAAATAG GTCTTCCCGT AATAGGTTAT ATGTTTATAA TAAATGTCCT TTTAGGAATT
CTTTCAAGAT TAGTTCCACA GATGAACGTA TTTATGGTAG GCATACCTTT AAAATCTTTA
TTGGTATTTT TAATATTTTT AGGGATGGTG CCATTATGGG CAGAAACTTC GGCAAAATTA
ACAATTTTGT TGGAAAAAAC ATTAGAACAC TTTCTTTCAG GATAA
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| Protein sequence | MELFDFVETQ FLNWGMLISR ITGMFIITPL LSGRFIPTTV KVFLVLSLSY MMLPQTNSIP
LNTPVIHIVL SLTNNFIVGF AMGLMAFMIL GAFSIAGELL GVESGFGLAT SMDPTMEESP
IIGQFVFLLA IFVFISLNGH LVVYEAILDS IKIFPLDLDF LDFNFTKFIT TKFVEMFFIA
LKIGLPVIGY MFIINVLLGI LSRLVPQMNV FMVGIPLKSL LVFLIFLGMV PLWAETSAKL
TILLEKTLEH FLSG
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