Gene Tmel_0842 details

Gene Information

• Locus tag: Tmel_0842
• ID: 5298362
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermosipho melanesiensis BI429
• Kingdom: Bacteria
• Replicon accession: NC_009616
• Strand: +
• Start bp: 880679
• End bp: 881269
• Gene Length: 591 bp
• Protein Length: 196 aa
• Translation table: 11
• GC content: 28%
• IMG OID: 640769119
• Product: hypothetical protein
• Protein accession: YP_001306088
• Protein GI: 150020734
• COG category: [S] Function unknown
• COG ID: [COG5011] Uncharacterized protein conserved in bacteria

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTAGAT TTGTAATAAA ATTCAAAAAG CTTGGTATGT ATAGATTTAT TTCAGGTCTT 
GATACCATAT CGTTGATTGA AAGAACTTTT AGGAGAACAC AGTTATCACT TATTTTTACT 
GAAGGTTTTC ATCCAAAACC AAAGTTTACT TACATAGATC CCGTTTCTAC AGGTGTGATA 
GATTTAGCGT TTTATCTTAC AATAGAGTTT TCTAAAGATT ATGACGAAAA AATTGTAAAA 
AGGAAAATAA AAGAAGTTCA ACCGTTATAT TTTGTAGTGG ATTTAGTTTC AAAAGATGAA 
ATAACACTTT CAAAAATAAA TGCGTACGAG TTTTTGGTGA TAATAAAGAA GCCATTTGAA 
TTGCCTGGTA AAGTTGTAAA GAAGACAAAG CGGGGATTTA AAGAAATTCA GATATCCACA 
CTAAGAAATT TGGATATTGT TGAAAAAAAA GATTATATTA TGTTAAACTA TATAGTTGAG 
AAGGGAAATA CTTTTAATCC ATATATTTTG TCAGATAATG TGTTTTTAGC TATAAGAAAA 
GAATGTTATA TTGATAACAA ACCTGTTTCT TCTCTTTTGA AGGGAGTGTA A 

 

Protein sequence

MSRFVIKFKK LGMYRFISGL DTISLIERTF RRTQLSLIFT EGFHPKPKFT YIDPVSTGVI 
DLAFYLTIEF SKDYDEKIVK RKIKEVQPLY FVVDLVSKDE ITLSKINAYE FLVIIKKPFE 
LPGKVVKKTK RGFKEIQIST LRNLDIVEKK DYIMLNYIVE KGNTFNPYIL SDNVFLAIRK 
ECYIDNKPVS SLLKGV