Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_0837 |
Symbol | |
ID | 5297994 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | + |
Start bp | 876724 |
End bp | 877221 |
Gene Length | 498 bp |
Protein Length | 165 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 640769114 |
Product | peptide deformylase |
Protein accession | YP_001306083 |
Protein GI | 150020729 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGGATAA GGCTATACGG TGATCCTATA CTTAGAAAAT CTGCAAAAGC AGTAAAAGAT TTTAAATATC TACAGGAAAT AAAGGAAGAC ATGCTTAAAA CAATGTATTT AGAAGATGGG GTAGGTCTTG CCGCACCACA AGTGGGACTT TCATTGAGGT TTTTTGTAAT GGACGATGGA AGTGGACCAC TTTTTATTGT AAACCCGGAA ATCATAGCTC ATTCTGAAGA AAAAGAAATT GGCGAGGAAG GATGTCTTAG TTTACCGGGA ATTTTTGAAA ATGTGGAAAG GTATAAATGG GTGAAATTAA AATTTCAAGA TGAATATGGG AAAGTTCAGA CAAGATTATT CGAAGGTTAC AGTGCAAGGA TAGTGCAACA CGAAAGAGAC CATTTGGATG GTATTTTGTT TATCGACCAC CTTCCAAATG CTGTAAAAAG AAGGCTTGCT CCTGAGCTTT CCAAAATAAT GAGGATGAGA ATGGAGGAAA AAAAGTGA
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Protein sequence | MRIRLYGDPI LRKSAKAVKD FKYLQEIKED MLKTMYLEDG VGLAAPQVGL SLRFFVMDDG SGPLFIVNPE IIAHSEEKEI GEEGCLSLPG IFENVERYKW VKLKFQDEYG KVQTRLFEGY SARIVQHERD HLDGILFIDH LPNAVKRRLA PELSKIMRMR MEEKK
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