Gene Tmel_0837 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_0837 
Symbol 
ID5297994 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp876724 
End bp877221 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content37% 
IMG OID640769114 
Productpeptide deformylase 
Protein accessionYP_001306083 
Protein GI150020729 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0242] N-formylmethionyl-tRNA deformylase 
TIGRFAM ID[TIGR00079] peptide deformylase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGATAA GGCTATACGG TGATCCTATA CTTAGAAAAT CTGCAAAAGC AGTAAAAGAT 
TTTAAATATC TACAGGAAAT AAAGGAAGAC ATGCTTAAAA CAATGTATTT AGAAGATGGG
GTAGGTCTTG CCGCACCACA AGTGGGACTT TCATTGAGGT TTTTTGTAAT GGACGATGGA
AGTGGACCAC TTTTTATTGT AAACCCGGAA ATCATAGCTC ATTCTGAAGA AAAAGAAATT
GGCGAGGAAG GATGTCTTAG TTTACCGGGA ATTTTTGAAA ATGTGGAAAG GTATAAATGG
GTGAAATTAA AATTTCAAGA TGAATATGGG AAAGTTCAGA CAAGATTATT CGAAGGTTAC
AGTGCAAGGA TAGTGCAACA CGAAAGAGAC CATTTGGATG GTATTTTGTT TATCGACCAC
CTTCCAAATG CTGTAAAAAG AAGGCTTGCT CCTGAGCTTT CCAAAATAAT GAGGATGAGA
ATGGAGGAAA AAAAGTGA
 
Protein sequence
MRIRLYGDPI LRKSAKAVKD FKYLQEIKED MLKTMYLEDG VGLAAPQVGL SLRFFVMDDG 
SGPLFIVNPE IIAHSEEKEI GEEGCLSLPG IFENVERYKW VKLKFQDEYG KVQTRLFEGY
SARIVQHERD HLDGILFIDH LPNAVKRRLA PELSKIMRMR MEEKK