| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0831 |
|---|
| Symbol | |
|---|
| ID | 5297997 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermosipho melanesiensis BI429 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009616 |
|---|
| Strand | - |
|---|
| Start bp | 871310 |
|---|
| End bp | 873043 |
|---|
| Gene Length | 1734 bp |
|---|
| Protein Length | 577 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 640769108 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001306077 |
|---|
| Protein GI | 150020723 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00618018 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGATAGTAC TAAACAACGT ATCCTTACAT TTTCCAGGAA AAGAACTCTT AAATAATGTA
TCATTAAATA TTTCTGATGG TGAAAAAGTA GCATTAATAG GAAAAAATGG AAGTGGTAAA
ACAACGCTTT TAAAGGCAAT AGTTGGTGAA TTCAAAGAAT ATACAGGACA AATAAATACC
ACCGGTAAGG TGGTTTACCT CGACCAGTAT AGAACATTTA GCAGTAATAC CCCTTACGAA
TATTATATGG AGGTAGCTGA TACTCCGGAA AAAGAAAGAC TTGTAAGAAG TATTCTTAAA
GGTTTTGGTT TTGAAGAAGA AGACTGGAAA AGAAACTTAA GCACGTTTAG TGGGGGAGAA
AAAACAAGAT TACAAATAGG TAGACTTTTT CTAGAAGAAG CAGATTTCAT ACTTTTAGAC
GAACCTACTA ATTATTTAGA TATAGCGGGA ATTCACTTTT TAAAAAATCT ACTAAAAAGC
TTTAAAGGTG GATATATAAT AATTTCACAC GATAGAAGTT TTTTAAGGGA CACGTGTGAA
AGATTTTTAG AAATCAACAA CGGAAAGATA TGGGATTTTA GAATGGGATT TGATGCATAT
CTTAAAGAAA GAGAGTCGTT AATACTCCAT CAAAAACGTT CGATGAAAAA TAAGCAAAGG
GAAATAGAGA GGTTGAAGAA AATTATTGAA AGATACAGAA AATGGGGAAG AGAAAAGTTT
ATAAAACAAG CAAAAAGTAA AGAAAAAATT CTACAGAAGA TTTTAGAAGA GCTACAATCT
GAAGTTATTT TTGAAGAAGA AACGAAAAAA AATGTCTCCA TCCCTATCCC AGAAAATACA
GGTTATATAG TATTGAACGT AAAAGGGTTA AAATTTCTAA ATATCATAGA TGATGTAACC
TTCACAGTAT ACAGTGGTGA TAAAATAGCT ATCCTAGGAC CCAATGGCTC TGGAAAGAGT
ACTATCTTAA AGTTTATTTC TGGAAAACTT AAAGGAGAAG GGTTAGTAGA ATTTGGATAT
AACGTAAAAG TGGAATTTTT AGATCAGTTT GTGGAAGAGT TAGATGAAGA AAATAGTGTC
TTTGAAGAAA TAGCAAATGA AATGGAAATG CAACCAGACT ATGTAATCAG AGCATATGCA
GGAAGATTTG GTTTCAAAGG CGAAGACGTT TTCAAAACTA TCTCCGAATT AAGCGGTGGA
GAAAGGCAAA TTCTCGCCCT TGCAAAAGTA CTGCTTAAAA AACCAAATCT ATTGATATTA
GACGAACCTA CCAATCACAT GGATCTTGAA ACTGTAGAAG CACTTGAAGA CGCTCTAAAA
GAATACAAAG GAAGCCTTAT ACTTGTTTCC CACGACGAAG AACTTGTAAA GAATGTTTGT
AACAGATATT TTATTTTAAA AGACAAAAAA TTACTTGAGG TATCCGATAT ATCACAATAC
GAACCAAAGG AAGAAAAAAA AGAAGAAAAA ATAATAAATA CAGATTACGA AGAAAAAAAG
AGAAGAAAAA ATAGGATAAA AAAATTAAAG ATGGAAATAG AAAAATTAAA CGAAGAAGAA
AAAAGGTTGT TGAAAAAAAT AGATGAAATT GATTTAAAAC TATTAAATGT TGGTTCTGAT
TATATAAAAG CAATGGAACT TTCTGAAGAA AAAGAAAAAT TAGAGGAAAA AATACTTAAC
TTGCTACAAA AAATCGATGA GATGGAAAAA GAGATAAAAT ATCTTGAAAT CTAG
|
|---|
| Protein sequence | MIVLNNVSLH FPGKELLNNV SLNISDGEKV ALIGKNGSGK TTLLKAIVGE FKEYTGQINT
TGKVVYLDQY RTFSSNTPYE YYMEVADTPE KERLVRSILK GFGFEEEDWK RNLSTFSGGE
KTRLQIGRLF LEEADFILLD EPTNYLDIAG IHFLKNLLKS FKGGYIIISH DRSFLRDTCE
RFLEINNGKI WDFRMGFDAY LKERESLILH QKRSMKNKQR EIERLKKIIE RYRKWGREKF
IKQAKSKEKI LQKILEELQS EVIFEEETKK NVSIPIPENT GYIVLNVKGL KFLNIIDDVT
FTVYSGDKIA ILGPNGSGKS TILKFISGKL KGEGLVEFGY NVKVEFLDQF VEELDEENSV
FEEIANEMEM QPDYVIRAYA GRFGFKGEDV FKTISELSGG ERQILALAKV LLKKPNLLIL
DEPTNHMDLE TVEALEDALK EYKGSLILVS HDEELVKNVC NRYFILKDKK LLEVSDISQY
EPKEEKKEEK IINTDYEEKK RRKNRIKKLK MEIEKLNEEE KRLLKKIDEI DLKLLNVGSD
YIKAMELSEE KEKLEEKILN LLQKIDEMEK EIKYLEI
|
|---|
| |