| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0830 |
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| Symbol | |
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| ID | 5297996 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | + |
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| Start bp | 869976 |
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| End bp | 871313 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 640769107 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_001306076 |
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| Protein GI | 150020722 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000918772 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGGGATAT ACAGAGATCT TTTTAAAATA GCAATTCCCG TAGCGCTACA GCAGTTTTTA
TTTAGTAGTG TGAGTTTTTT GGACACGTTG ATGATAGGTA GATTAGGAGA AGATGCAATT
GCAGCTATTG GTCTTGCAAA TCAGTTTTTC TTTTTTTACA ATATAGTATT ATTTGGTCTT
GTTTCTGGTG GAGCAATCTT TTTTTCCCAA TTTTGGGGGA AAGGTGACTT TGAAGGATTA
TCAAAATCTA CAGCTCTTAC AACTTTATCA TCTCTTTTTG TTTCTATTCC GTTTTTTGTT
TTAAGCTTGT TTTTCCCAGG TTATGTAATG AGATTTTTTT CTCCAGATCC TATTGTTATT
GAACTTGGAG TAAAATATAT AAAGATTTTG TCAATATCTT TTCCTATATT TGCAATATCA
ATGGTATTTT CATTTATGCT TAGAAGTATA CACAAAGCCC ACATTCCAAT GTATACTACG
ATAATAGAAT TAACAACAAA CGTTTTTCTA AACTATGTAC TTATTTTTGG AAATTTTGGT
TTTCCAAAAT TAGGAGTTAT AGGTGCTGCA ATTGCGACGG TTTTTTCAAG GATTATAGGT
TTATTTGTTT TGATTGTAAC AGTGAAGTTA CAGAAACTTC CAGGTATGTT TTCCTTACAT
CACATAGGAG CGCTAAACAA AAATTTTATA AACCGCTTTT TTCACTATAC ACTTCCTACA
CTTGCCAATG AATTTGCATG GTCACTTGGT TTTACCATGT ATTCTGTGAT TTATGCACAT
ATGAGTACAA AAGTTATAGC GGCAAGGAAT ATAATAGGTA CCATCGAAGG GTTTGCATGG
GCATTTTCTT TTTCACTTGC AAATGCAGCA TCGGTAATAA TTGGTAATTA TTTAGGGGCA
AAAAGATTTG GAGAAGCGTA TAAGATTTCA AGAAAAATAA TCAAACTCAC GGAAATTGTA
GCCACAATAT CTGCCGCTGC AACTTATATA TTAACAGTTT TTTCAGTTGA TCTGTTCAAT
ATATCTCAAG ATGTAAAAAG TTTGGTGATA GTTGCTATGG CTATATCCAT GGGATTTGTT
CCTATTAAAA TATTTAATGG TTTAAATATC GTTGGTTTTT TACGTGCAGG CGGAGATACA
AGATTTTCCT TTGCGGTAGA GGCAACAACC CTTTGGGTTT TGGGTGTTCC GCTTGCAGCG
ATAGGTGGAT TAATATTAAA ACTAAGTTTT CCATTGGTTT TACTATTAAC AATGGTAGAT
GAAATTACAA AGTTTTTCAT ACTTTTATCA AGGTATAAAA GTAGAAAATG GGTAAGAAAT
GTGGTTGAAA ATATCTAG
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| Protein sequence | MGIYRDLFKI AIPVALQQFL FSSVSFLDTL MIGRLGEDAI AAIGLANQFF FFYNIVLFGL
VSGGAIFFSQ FWGKGDFEGL SKSTALTTLS SLFVSIPFFV LSLFFPGYVM RFFSPDPIVI
ELGVKYIKIL SISFPIFAIS MVFSFMLRSI HKAHIPMYTT IIELTTNVFL NYVLIFGNFG
FPKLGVIGAA IATVFSRIIG LFVLIVTVKL QKLPGMFSLH HIGALNKNFI NRFFHYTLPT
LANEFAWSLG FTMYSVIYAH MSTKVIAARN IIGTIEGFAW AFSFSLANAA SVIIGNYLGA
KRFGEAYKIS RKIIKLTEIV ATISAAATYI LTVFSVDLFN ISQDVKSLVI VAMAISMGFV
PIKIFNGLNI VGFLRAGGDT RFSFAVEATT LWVLGVPLAA IGGLILKLSF PLVLLLTMVD
EITKFFILLS RYKSRKWVRN VVENI
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