Gene Tmel_0824 details

Gene Information

• Locus tag: Tmel_0824
• ID: 5298288
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermosipho melanesiensis BI429
• Kingdom: Bacteria
• Replicon accession: NC_009616
• Strand: -
• Start bp: 864007
• End bp: 865881
• Gene Length: 1875 bp
• Protein Length: 624 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 640769101
• Product: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
• Protein accession: YP_001306070
• Protein GI: 150020716
• COG category: [D] Cell cycle control, cell division, chromosome partitioning
• COG ID: [COG0445] NAD/FAD-utilizing enzyme apparently involved in cell division
• TIGRFAM ID: [TIGR00136] glucose-inhibited division protein A

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTTTTG AAAGGCCAAA AGATGACATA GAATTTGATG TTATAGTTGT TGGAACAGGT 
CATGCTGGGA TTGAAGCAGC ACTTGCTCCT GCAAGACTTG GATTAAGAAC GCTTATTCTA 
ACAACCAACT TGGATAACGT TGGCTGGGCT CCTTGTAATC CAGCAATAGG TGGACCTGCA 
AAAGGAATAG TTGTAAGAGA AATAGATGTA TTAGGTGGAG AAATGGCAAA AACCACAGAT 
GAAACCATGA TAAATGTAAG GATGTTAAAT ACGGGAAAAG GACCTGCTGT TAGAGCCCTA 
AGGGCTCAAA TAGATAAATA TGCATATTCA CAAATGATGA AAAACAAACT TCAAAGCCAA 
GAAAATCTTG TTTTGAGGTT TGGTTTAGTT GAGAAGATAT TGGTTAAAGA TGGAAAAGTT 
TATGGAGTTG TTGATTCTTT TGGTATAGAT TATCGTGCAA AAGCCGTGAT TTTAACAACA 
GGCACTTTTT TAAGAGGAAA AATATTTATA GGAAGAGATA CCATGGAAGC AGGAAGAATG 
GGTGATCTTC CCGCAAAAGG TTTAAGCAAA AGCTTAATGG ACATTGGATT CAAACTCTCA 
CGTTTTAAAA CAGGAACCCC CTCAAGAGTT TTAAAAAGTA GCATAAACTT CTCCAAAATG 
ATTAGACAAG ACACAGACGA TGAGCCTAGG GCTTTTTCTC ATTTTAGTGA ACCAAAAGTT 
TTACCTAAAG ATCATCCATG TTGGTTAACA CATACTAACG AAAAAACTCA CAAAATAATA 
AGAGATTATT TGGTATACTC TCCTCTTTAC GGTAAAGTGA AATTAATACA GAGTGTAGGC 
CCAAGGTATT GTCCTTCTAT TGAGGATAAA GTAGTAAAAT TTAACAGAGA TTCTCATCAG 
GTTTTTGTGG AACCAGAAGG AAAAAATTCA CAAGAATATT ATCTAAATGG CCTTTCAACA 
AGTCTACCTT ATGCTGCACA GATAAAAATG CTTAGAACTA TTCCAGGCCT TGAAAATGTT 
GTAATAGTAA GACCTGCATA TGCCATAGAA TATGACTATA TAGATCCTCT TCAACTATAT 
CAAACACTTG AATCGAAGTT AATCGAAGGA CTTTATTTTG CAGGTCAAAT AAATGGTACA 
AGCGGATACG AAGAAGCAGC GGGACAAGGA CTTGTTGCTG GAATAAACGC AGCTATGAAA 
ATACTTGGCG AAAAACCACT TATCTTAAAA CGTTCTGAAA GTTATATTGG AATACTAATC 
GATGATTTAA CTACAAAGGG CGTTGATGAA CCATATAGAC TTCTTACTTC TAGGGCAGAA 
TACAGACTTT TATTGAGACA CGACAACGCA CATATAAGAC TTGCAAAATA CGGATATAGA 
GTTGGATTAA TTCCAAAATG GTTTTACGAA AAAGTTTTGA ATTTAGAAAA AAATATTAAA 
CTACAAATTG AAAGACTCAA AAATGTTAAA GTACCAGTTT CCGATAGAGT GAATGACATT 
TTGGTAAAAC TAGGTTCAAC TCCTCTAAAG GAAGGTACAA AACTATACAA TCTCTTAAAA 
AGACCAGAAA TTAGTTATAA CGATATAGAA GAACTTGATA GTGAACGCAT AACGGACAAA 
GAACTTTTGG AACAAATTGA GATATACATA AAATACGAGG GGTATATAGA AAAAATGCTT 
GAAGAAGTAA AAATCTTCGA AGAATACGAA TCAGTAGATA TATCAAAAAT AAACCTTGAT 
AAGGTACCAA ATCTTTCAAC AGAGGCAAGG GAAAAGTTGA AAAAAGTAAT GCCACGCTCT 
ATAGGCCAAG CTATGAGGAT ACCAGGAGTC ACTCCTGCCG ATATTGCAAA TATAATTAGT 
TATATTGAAA AATAA 

 

Protein sequence

MFFERPKDDI EFDVIVVGTG HAGIEAALAP ARLGLRTLIL TTNLDNVGWA PCNPAIGGPA 
KGIVVREIDV LGGEMAKTTD ETMINVRMLN TGKGPAVRAL RAQIDKYAYS QMMKNKLQSQ 
ENLVLRFGLV EKILVKDGKV YGVVDSFGID YRAKAVILTT GTFLRGKIFI GRDTMEAGRM 
GDLPAKGLSK SLMDIGFKLS RFKTGTPSRV LKSSINFSKM IRQDTDDEPR AFSHFSEPKV 
LPKDHPCWLT HTNEKTHKII RDYLVYSPLY GKVKLIQSVG PRYCPSIEDK VVKFNRDSHQ 
VFVEPEGKNS QEYYLNGLST SLPYAAQIKM LRTIPGLENV VIVRPAYAIE YDYIDPLQLY 
QTLESKLIEG LYFAGQINGT SGYEEAAGQG LVAGINAAMK ILGEKPLILK RSESYIGILI 
DDLTTKGVDE PYRLLTSRAE YRLLLRHDNA HIRLAKYGYR VGLIPKWFYE KVLNLEKNIK 
LQIERLKNVK VPVSDRVNDI LVKLGSTPLK EGTKLYNLLK RPEISYNDIE ELDSERITDK 
ELLEQIEIYI KYEGYIEKML EEVKIFEEYE SVDISKINLD KVPNLSTEAR EKLKKVMPRS 
IGQAMRIPGV TPADIANIIS YIEK