Gene Tmel_0818 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_0818 
Symbol 
ID5298119 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp858286 
End bp859533 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content35% 
IMG OID640769095 
Productextracellular solute-binding protein 
Protein accessionYP_001306064 
Protein GI150020710 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAAAGT TTATTATTTT CTTTTTAGCT ATTTTACTTA CATTAAGTGT GTTTGCACAA 
GAAAATGCAT TGGAAATATT TAGTTGGTGG ACTGGTGGAG GGGAAGAAGA AGGTTTGCTT
GCTTTATTTA AACTATTCAA CGAACATTAT CCTGATGTAA AAATAATAAA CGCTGCAGTT
GCAGGAGGAG CAGGTACAAA TGCAAAAGCT GTATTGAAGA CGAGAATGCT TGGTGGAAAT
CCTCCCGATT CCTTCCAAGT TCATGCAGGA ATGGAATTGA CGGATACATA CGTAATACCA
GGACTTATGG AACCCATTAC TTGGATTTTA AAAGAGATTG ATGCGTATGA TAAGTTTCCA
AAAGATTTGA TAGATATAGT AAGCTATGAA GGAGAAGTTT ATTCAATACC TGTCAATGTT
CACAGGGCAA ATGTTGTGTT TTATAACAAG GAAATAGCCA AGAAAATTGG GATGACAAAA
GAACCAACTA CTTGGACAGA ATTTTTGACA TATTTGGATA AAGCTCAGAA AATGGGATAT
GCGGGGATAT CTCTTGGAGA TAAAAATAAG TGGACTTCGT TGCATTTGTT TGAAAGTATA
ATGCTTTCAC AATTAGGTCC TGAAAAGTAT AACAAGCTCT GGAAAGGGGA AGCTTCATTT
AATGATCCAG CAATTAAACA AGCGTTAATT ATATTGAAAG ATGTACTAAA CTATGTAAAT
TCAGATCATT CTGCCTTAAC TTGGCAAGAT GCAACGAGAA TGGTATTTGA AGGAAAGGCA
TTTTGTAACA TGATGGGAGA TTGGGCAGAA GGTTATCTAA AAACATTAGG TTGGAAACCA
GGTGTCGAAT TTGGTTGGTT TGCTTTGCCT GGTACCCAAA ATGCATTTAT GCTTGTTTCT
GATACATTTG GATTACCCAA GAACGCACCT CATAGAGAAA ATGCAATAAA GTGGCTCAAA
TTTTTGGCAA CAGTTGAGGC ACAAGATACA TTTAATCCTA TAAAAGGATC TATACCTGCA
AGGATAGATG CTGATAAATC AAAGTATGAT TCATACTTAA AATGGTCAAT GAATGATTTT
TCTACAAAAG TCATTTCACC TTCTATTATC CACGGTTCAG CTGCACCTGA ATCGTTTGCA
ACGGCTTTAA TGGATGCAAT TAATATATTT GTCACTGAGA AAAACGTTGA TAAAACATTT
AAGGAAATTT TGTGGATAGC AGAAGATAAT GGTTATGTAA CAGATTAA
 
Protein sequence
MKKFIIFFLA ILLTLSVFAQ ENALEIFSWW TGGGEEEGLL ALFKLFNEHY PDVKIINAAV 
AGGAGTNAKA VLKTRMLGGN PPDSFQVHAG MELTDTYVIP GLMEPITWIL KEIDAYDKFP
KDLIDIVSYE GEVYSIPVNV HRANVVFYNK EIAKKIGMTK EPTTWTEFLT YLDKAQKMGY
AGISLGDKNK WTSLHLFESI MLSQLGPEKY NKLWKGEASF NDPAIKQALI ILKDVLNYVN
SDHSALTWQD ATRMVFEGKA FCNMMGDWAE GYLKTLGWKP GVEFGWFALP GTQNAFMLVS
DTFGLPKNAP HRENAIKWLK FLATVEAQDT FNPIKGSIPA RIDADKSKYD SYLKWSMNDF
STKVISPSII HGSAAPESFA TALMDAINIF VTEKNVDKTF KEILWIAEDN GYVTD