| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0806 |
|---|
| Symbol | |
|---|
| ID | 5298220 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermosipho melanesiensis BI429 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009616 |
|---|
| Strand | - |
|---|
| Start bp | 846071 |
|---|
| End bp | 847255 |
|---|
| Gene Length | 1185 bp |
|---|
| Protein Length | 394 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 640769083 |
|---|
| Product | phosphofructokinase |
|---|
| Protein accession | YP_001306052 |
|---|
| Protein GI | 150020698 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0205] 6-phosphofructokinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTTC TATACGCACA ATCTGGTGGT GTTACAAGTG TAATTAACGC ATCTGCTTAT
GGTATTCTTG ATGAGGCACA AAAGGCAGGT TTAGAAGTTT ATGTGGGAAT TCACGGTATT
TCTGGGGTAT TAAAAGAAAA TCTTTTAAAA ATTAACGGAA AAAGCATCGA CGGGTTAAAA
TACACACCTT CTGCTGCTTT CGGTTCATGT AGAAGAAAAT TAAAAAGTCA AGAAGATATT
AATAAGCTTT TTGAAATTTT TGAAAAATAT GAAATAGAAT ATTTCTTTTA TAATGGCGGT
AACGATTCTA TGGATACCGC TTGGAAATTA TATACCGAAG CAAAAAAAAG AAATACACCC
CTAAAAGTTA TTGGTGTACC AAAAACAATA GATAATGATT TACCATATAC CGATCATTGT
CCGGGATATG GTTCTGCAGC AAAATATGTC GCAATTGCTA TTATGGAAGC AACATTAGAT
TTGAGGAGTA TGTATGTAGA TTCCACAAGG GTTTTTGTCA TGGAAATAAT GGGAAGACAT
GCCGGATGGC TTGTGGCAGC TGCAGGTTTA GGTTGGTTAA ATGGAATAGG AGCAGATATA
ATTTTGTTCC CTGAAGTACC TTTCAACAAG GAAAAGTTTT TGGATAAGGT AGATGAAACA
ATAAGAAAAA AAGGGTATTG CTCCATAGCC GTATCAGAAG GAATTAGATA TCCAGATGGT
TTCTTTGTAG CAGATATGGG ATATACCGAT AGTTTTGGAA ATAGACAACT AGGTGGTGTG
GGCTTTACCA TTGCAGGTAT GATTAGATCT GAGCTGTCCT TAAAAACACA CGTTGCAATC
CCAGATTATT TACAAAGAAG TGGAAGACAT ATTGCAAGTA GAACGGATAT AGAAGAAGCT
GAAGGTGTGG GAAGACAAGC TGTAAAATTA GCACTTGACG GTATATCTGG TGTAATGGTT
ACCATAAACA GAATTAGCGA TAATCCTTAC AAAATAGAAT ACAGCACTAT CGAACTGAAT
AAAGTTGCAG ATAAAACAAA ATATCTTCCA GAGGAGTTTC ACAAAGATTT TGAAGTTACA
GAGAAATACT TTAAATATGC AAAACCCTTA ATAGAAGGTG AATTGTTCCC TGAATTTAAA
AATGGTTTGC CAAACTACAC AATTTTTAAG GAGGTTGACG GGTAA
|
|---|
| Protein sequence | MKVLYAQSGG VTSVINASAY GILDEAQKAG LEVYVGIHGI SGVLKENLLK INGKSIDGLK
YTPSAAFGSC RRKLKSQEDI NKLFEIFEKY EIEYFFYNGG NDSMDTAWKL YTEAKKRNTP
LKVIGVPKTI DNDLPYTDHC PGYGSAAKYV AIAIMEATLD LRSMYVDSTR VFVMEIMGRH
AGWLVAAAGL GWLNGIGADI ILFPEVPFNK EKFLDKVDET IRKKGYCSIA VSEGIRYPDG
FFVADMGYTD SFGNRQLGGV GFTIAGMIRS ELSLKTHVAI PDYLQRSGRH IASRTDIEEA
EGVGRQAVKL ALDGISGVMV TINRISDNPY KIEYSTIELN KVADKTKYLP EEFHKDFEVT
EKYFKYAKPL IEGELFPEFK NGLPNYTIFK EVDG
|
|---|
| |