Gene Tmel_0788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_0788 
Symbol 
ID5298054 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp830117 
End bp830755 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content31% 
IMG OID640769066 
Producthypothetical protein 
Protein accessionYP_001306035 
Protein GI150020681 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1392] Phosphate transport regulator (distant homolog of PhoU) 
TIGRFAM ID[TIGR00153] conserved hypothetical protein TIGR00153 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTTGT TTTTTGGTAA AAAAGAACAA ATCGTAATAG AACTTTTTGA AAAACACCTT 
GATGCCGTTG AAGAAACTAT AAAAAAACTC GCAAAAGTAG TAGAAGAAGA AAATTTAGAA
AAAAGAAAAC AGCTTTCAGA AGGAGTAAGA AAGCAAGAAA CAGAAGCTGA TAAAATTAGG
AGAAAAGCAG AGCTTGAAAT GTATTCTGGG GCTTTTTTAC CAAACTTTAG AGGAGATCTT
CTAGGAACTA TAGAAGCTCT AGATAGAATA GCAAATAAGG CCGAATCCGT AGCCGACGAA
ATAGACTTAC AAAATCTTAT AATCCCAAAG GAAATTAAAG AAAATATTAT TATATTAGTT
GAAAAATCGC TTGAAACATA TCAAGCGTTA AAAAAGGCGG CAAAAGAGAT GTTTAAAGAT
TTCGAAAAGG CAAGCGAAAT GATAGTAGAA ACGGAAAAGT TTGAACATGA AACAGATGAA
ATAGAAAGAG AAACTATAAG GAAATTATTT TCCCTTAATA TTTCACTTGC AGAAAAAATA
CAACTAAAAA AATTAGTACA TAGAATAGCC GATATTTCAG ATACATCGGA AGATGTTTCC
GACAGAATTC AAATAATACT CTATAAAAGA AAGGTTTAA
 
Protein sequence
MSLFFGKKEQ IVIELFEKHL DAVEETIKKL AKVVEEENLE KRKQLSEGVR KQETEADKIR 
RKAELEMYSG AFLPNFRGDL LGTIEALDRI ANKAESVADE IDLQNLIIPK EIKENIIILV
EKSLETYQAL KKAAKEMFKD FEKASEMIVE TEKFEHETDE IERETIRKLF SLNISLAEKI
QLKKLVHRIA DISDTSEDVS DRIQIILYKR KV