| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0750 |
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| Symbol | |
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| ID | 5298219 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | + |
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| Start bp | 790286 |
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| End bp | 792745 |
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| Gene Length | 2460 bp |
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| Protein Length | 819 aa |
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| Translation table | 11 |
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| GC content | 26% |
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| IMG OID | 640769029 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_001305998 |
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| Protein GI | 150020644 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTATT TTGCATTATT TTTAAGTTTG GTATTAATTT TACATCTTTA CGAAAGAAAT
TTGCATAAAG TAACAAAAGC ATTTTTGCAT ATATCTTTTA TACTTTTTAT CATCTCTTTG
CTTGAAGTTT TAAAAAGAAG GTTTAACATT TTTCCAATCC AACTCATTGA AGATATTATA
GGCCTCACTT TGATTCCATC TTTTTACGCC TTTTCAGAAG ACTTTTTGGG AAAAAAGAGA
AATCCAAAAA AACGGCTCTT TATTTCCATC CCCGTTTTTA TTCTAATCTT ACCAAACTTC
TTTTCCAATA AAAAAGTAGA TCTATTGTTC AACAATAAAA TTTTAGGTAC ACTATTTTTG
ATTTATACTA TAACCATATT AGTAGCAAGT TTTAGAAATT TAATAAAAGC AGAAGTAAAA
AAAGCCGTAA AATACGTTAT TGTATCTATT TTTTCCATAC TCTTTGTTTA CATATCTATT
GAGATTCTAT TTTTAAAATT TAATACTACG CATGTTACCT TTTTTACTGT CCTTTCTTTC
TTAATATCAG AATTTGTTTT AATAAGGAAA AGCTGGTTAA GTAGCTTGGA AGAAATAAAG
CAAAAACTAT TAATGACTCT TTCAGATGGA ATAATTCTTG TGGATAAAAA AGGATATGTT
ATGGATTTAA ATGAAACTGC CTCAAAAATC ATTAGACTTG ATTTTAATAA TATAGTGAAT
AAAACTCTTT CAAAAAACTT CGATGAAGGT GAAATAATCT TTCAAAATGA GTCATACTAT
ATGGTTAAAA AAATTCCCTT TGAAGATGGA ACAGCGTACT TTTTTAGAGA TGTGACAAAA
GAAATGGAAT TTTCAAAAAA ACACAACATT GCCGATAAAC TTTTTTCGAC GCTTTTCAAA
AATATACCAG ACGGGGTTGC AATAATTACA CCAAAAGGAA AAATAATTGA TTGTAATAAG
CAATTTACTA AATTATTTGG GTTAAAAAGA CTGGAAAATT TAGAAACTAT AGTACCACCT
CTTCTAAAAC AAGAATCAAA ACTTTTAATT TTAGAAGTTC TAAAAAACGG TTATGCAACC
TACGAAACTA TTAGAAGATC TAAAGATGGA AAAGAAATAT ACGTAAAGAT AAAAGCAATT
AAATTCGAAA TAGACGATAA AGTATTTATA TATACAATTT ACACTGACAT CTCAAAAGAA
AAAACGCTCT CTGAACAACT AACGAAACTT ATAGAAAAAG ACCCTTTAAC TAATACATAC
AACAAAACAT ATATTACAAA ACAAATAAAA TATCTTTCAA ATATATTTTT CCATTCATTA
ATTTTTGTAG ATATAAAAGA CTTTAAGTGG ATAAATTCAA TAAAAGGATA TAAATATGGA
AATGAACTAT TGAGGAACAT CGCAGCAAAA CTAATGGATT TTGTTTCCGA GGAAAAAATA
GATGCAATAA TATCACGAGC TCAGAACGAC GAATTTTGGA TTTTGATAAA AGATATAGAC
ATAGATTCAC AAAAAGCTTA TCAAAAAAAT AAAAAATTAA TAGAAAAAAT AAAGCAAAAA
TTATCAACTT TCGAACAAAA ATTCTATATT GGATCACATC TATTTAAAAA CTCCGAAGAT
CTAGAAGAAA TAATAAGAAA AACAACTCTT GCACTTTCAA AATCAAAAGA TGTAGAAATG
GAAATAGTAT ATTCCAAAGA AATGGAAGAA CAGGTAATTA AAGAAGTAAC CAAAGAAATA
CAAATAAAAC AAGCAATAAA AAACAGAGAT TTCATTCCAT TCTTACAACC TATCTCAAAA
GAAAATATGG AAATAGTCGG AGCAGAGATG TTACTTAGAT GGGAGAAGGA AGGAAAAATA
ATACCCCCTA GTGATTTTTT AGACTACATA GAACGTTCTG GACAAATACA CGAAATATCA
CTTCAAGTTT TTGAAAAAAC AATGGAATTT TTGAAAAAGC ATCCTAATCT TAAATTTATC
GATGTTAATA TTAGTCCCAT ACAATTAAAA GATAAAAACT TCTTCGATGA ATATCTCAAA
ATAATCGAAA AATTTAATAT TTCACCTAAA AAAATTGCCT TTGAAATAAC GGAAAATCTG
TTTTTAAGTT ATGACGAGCA AGTCAAAGAA AATATTTCAA AGATAAAAAA GGAAGGAATA
AAGTTATGTT TAGATGATTT TGGAACTGGT TATTCTTCAT TAAGTTACTT AAGAAATTTA
CCATTTGACA TGTTAAAAAT AGATAGAGAA TTTATAAAAA ATATCGACAA TGAACGAAAC
ACAAATTTGT TAAAAGCTAT TTATAGTATT TGTGAAACAT TCAATTTAAC CCCTATACCA
GAAGGCGTAG AAACTGTAAA ACAGCTTGAA ATACTTTCTA TGATTGGATT TAAATTATTC
CAAGGATACT ATTTTGGAAA ACCTATGTCA TTGGAAGAAT TTGAAAAAAT TGTAAGTTAA
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| Protein sequence | MDYFALFLSL VLILHLYERN LHKVTKAFLH ISFILFIISL LEVLKRRFNI FPIQLIEDII
GLTLIPSFYA FSEDFLGKKR NPKKRLFISI PVFILILPNF FSNKKVDLLF NNKILGTLFL
IYTITILVAS FRNLIKAEVK KAVKYVIVSI FSILFVYISI EILFLKFNTT HVTFFTVLSF
LISEFVLIRK SWLSSLEEIK QKLLMTLSDG IILVDKKGYV MDLNETASKI IRLDFNNIVN
KTLSKNFDEG EIIFQNESYY MVKKIPFEDG TAYFFRDVTK EMEFSKKHNI ADKLFSTLFK
NIPDGVAIIT PKGKIIDCNK QFTKLFGLKR LENLETIVPP LLKQESKLLI LEVLKNGYAT
YETIRRSKDG KEIYVKIKAI KFEIDDKVFI YTIYTDISKE KTLSEQLTKL IEKDPLTNTY
NKTYITKQIK YLSNIFFHSL IFVDIKDFKW INSIKGYKYG NELLRNIAAK LMDFVSEEKI
DAIISRAQND EFWILIKDID IDSQKAYQKN KKLIEKIKQK LSTFEQKFYI GSHLFKNSED
LEEIIRKTTL ALSKSKDVEM EIVYSKEMEE QVIKEVTKEI QIKQAIKNRD FIPFLQPISK
ENMEIVGAEM LLRWEKEGKI IPPSDFLDYI ERSGQIHEIS LQVFEKTMEF LKKHPNLKFI
DVNISPIQLK DKNFFDEYLK IIEKFNISPK KIAFEITENL FLSYDEQVKE NISKIKKEGI
KLCLDDFGTG YSSLSYLRNL PFDMLKIDRE FIKNIDNERN TNLLKAIYSI CETFNLTPIP
EGVETVKQLE ILSMIGFKLF QGYYFGKPMS LEEFEKIVS
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