Gene Tmel_0746 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_0746 
Symbol 
ID5297612 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp785455 
End bp786276 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content32% 
IMG OID640769025 
ProductCof-like hydrolase 
Protein accessionYP_001305994 
Protein GI150020640 
COG category[R] General function prediction only 
COG ID[COG0561] Predicted hydrolases of the HAD superfamily 
TIGRFAM ID[TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATAAAAC TTATTTTAAC AGATTTAGAT GGGACATTGT TAAATGATGA AAAACACATT 
CCAGAAAGAA ATAAAATTGC TTTGAAAAAG GCAATGGACA AGGGAATCCA TGTAAGTATA
GCCACAGGTA GAAATTATTA TTCGGCAAAA AAATATGTAG AAGAACTTGG GTTGGATGTA
CCTGTTGTTT TCCAAAATGG TGCATTTATA TACATGCCAT TTGAAAACAA AATTTTGTAT
GAAACTCCGT TACATTCAGA TATAGCAAAA CAGTTGATAG ATTTTGCAAG AGATGAAGGT
TTAGATTATA TTTTATTTTC GGACTTTTTT GATGAAAAGG ATATGTACAT GGACAAAGAA
CACCAAGGAG GATATGTAAA ATATTTGCAG CAAAATAGTT GGAGAATAAA TAAAGTAGAT
GATGTTAAAA AGTACATACT TGAAGATACC GTAGCAGAAG TGGTGTTAAT GGGAAAAGAG
GACAAAATTT TAAAGGTTGT TGAGATTTTA AGAAGAAAAT ATCAGGGAAA ATTTAGCGTG
GTTAAAAATA ATGTTATTGA TGGATGGGCT TTCTTTGAGT TTTTTGGAAA AGGTGCATCT
AAAGAGGATG CTTTGAGATT TTTACTTGAC TATTTTGGTG TTTCTGAAAA TGAAACGATG
TTTTTGGGAG ATAGTTACAA CGATATAGGA ATTATGAAAT TAGTAGGATT TCCAGTTGCT
ATGGAGAATG CGTTTGAAGA AGTAAAGAAA GTAGCAAAGT TTGTGACACT TTCTAACAAC
GATGGGGGAG TAGGTTTTGC GGTGGAAAAG TTTGTGCTTT AG
 
Protein sequence
MIKLILTDLD GTLLNDEKHI PERNKIALKK AMDKGIHVSI ATGRNYYSAK KYVEELGLDV 
PVVFQNGAFI YMPFENKILY ETPLHSDIAK QLIDFARDEG LDYILFSDFF DEKDMYMDKE
HQGGYVKYLQ QNSWRINKVD DVKKYILEDT VAEVVLMGKE DKILKVVEIL RRKYQGKFSV
VKNNVIDGWA FFEFFGKGAS KEDALRFLLD YFGVSENETM FLGDSYNDIG IMKLVGFPVA
MENAFEEVKK VAKFVTLSNN DGGVGFAVEK FVL