Gene Tmel_0742 details

Gene Information

• Locus tag: Tmel_0742
• ID: 5297567
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermosipho melanesiensis BI429
• Kingdom: Bacteria
• Replicon accession: NC_009616
• Strand: -
• Start bp: 782676
• End bp: 783209
• Gene Length: 534 bp
• Protein Length: 177 aa
• Translation table: 11
• GC content: 31%
• IMG OID: 640769021
• Product: putative transcriptional regulator
• Protein accession: YP_001305990
• Protein GI: 150020636

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.0083196
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTACGAGA TACTGAAAAT AATTTCTTCA CCACAGCTCT TTGAGGTTTT GAATTTTTTG 
AGAAACAACC CTAATAAAAA TCCAAGTTCT ATAGCAAGAG CTCTAGGATT TCATACCTTT 
ACCGTACAAA GGTATTTGGA AGTTCTCGAA AGATTTGGTA TAGTAAAGGC AAAGGTTGAA 
AAAAAGGTTG GGAGACCTTC TAAGAAATAT ACATATGTTG GCGGGAATAT CACCATCGAT 
TTTGACGATA TTTTGAGTAT GTTTGATTTA AAAAATAAAA AGGTGAGAGA AAAAAAGAAA 
AGCTTAAGGT ACAGTTATGA TTTAAAAGGG GAAAAAATTA ACGGAGTAGT AGATATTGAG 
AGAATAACAA AGTTATCTGA TATGGAAGGA AAAGTTTTGT TTTTAATTCC CCCTTTTGAT 
AGTGAGGGGA TACAAGTTGA GAAGATAATA GAAAAAGTGA AATTTTCAGA ATTCGATATA 
CTTTCATCGT TAAAAAAGTT AATATCTCTG GAAATAATCG AGGTGGTTGA ATGA 

 

Protein sequence

MYEILKIISS PQLFEVLNFL RNNPNKNPSS IARALGFHTF TVQRYLEVLE RFGIVKAKVE 
KKVGRPSKKY TYVGGNITID FDDILSMFDL KNKKVREKKK SLRYSYDLKG EKINGVVDIE 
RITKLSDMEG KVLFLIPPFD SEGIQVEKII EKVKFSEFDI LSSLKKLISL EIIEVVE