Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_0736 |
Symbol | |
ID | 5298079 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | + |
Start bp | 775390 |
End bp | 777837 |
Gene Length | 2448 bp |
Protein Length | 815 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 640769015 |
Product | alpha amylase, catalytic region |
Protein accession | YP_001305984 |
Protein GI | 150020630 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0366] Glycosidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAGAAGG GTATTTTGTT ATTTTTGGTA ATATTACTAA TTTTTTCTTC TTGTGTAAAA ACATCACCAG TTATATTAAA CATTTCACTT TATGGAGACA TTGAAAAACT GGATAGTTCT AAAACATTCA AAGTTCAAAG TTTCGAAGAA AACATACAAA TAGAAAGATA TAAATTAAAG ATACTCCAAG AAAAAAAACT AATATTTGAG AAAGACATTA CTACAAATTT TCACATCAAC CTTGGTGAAA TTATTCCTGG GAAATATACA ATTAGAATTG ATGCATATGA AAAAGATAAT CTAATACTTT ACGGCGAAAA AGAAGCGTTA CTATCATACG GCGAAAACAA CATCACAATA TATACGCGCT TTACAAATGG AAAATTAGTT ATAACCCTAT CTTCTGATGG AAATACAATA ACTCAATCAA AAATTACAGG AACGCTACCT GCTTCTCCTG TAAATACATT TATTGAAGAA AATAAAACAT ATATAGAAAA AGAAGTCTAT CCTGGTGTAT GGGAAATAAC CATAGATGCA ACCCTAAATG ATAATATTAA CAAAAACTAC AACACGGTAA TAGAAATTTT ACCGTCAAAA ACAAAAGAAA TAAATTTTGA AATAAACAAC AGTGGTATCA CTATCATGCC TGTGCTCCCA TATCTTGAAA AAATAAATAA TACAACTGCA CAATTAGACA ACGAGGGAAT AAAACTTTAT TGGGACTACG ACCTACCCGC AACCTTTTGG ATATACAAAG GTTCAAATGA TTTTGATATA TCATTCGTTG GAACTACAAC AAATAATTAT TTCATCGATA AAAATCCATT AAAAGAAAAA TATTTCTACT ATGTTAATGC AATACTTGAC GGAAAAGAAA GCGGATTAAC AAAAATTGAT GCAAAAAAAA TTATTGATGA AATTTTCTCC TCAAACATTA TGTACCTTTT ATTCGTAAGA TCGTTTTTTG ATAGCAATAA CGATGGCATA GGTAATTTAA AAGGAATCAC TCAGAAAATG GATTATTTAA AAGATTTAGG TATAAGCGTT ATATGGCTCA TGCCCATATT CAAAGCTACA TCATATCACG GTTACGATGT AGTTGATTAC TATAACATAA ATCCTGAATA TGGAACAATT GAAGATTTAA AAGAATTACT GGAAAAGGCT CATGAGAATA ACATAAAGGT TATTTTAGAC ATACCTTTAA ACCACAGCTC TGATGAAAAT ATATGGTTTA AAGACGCGAT TGAAAATACT ACCAATTCAA AATATTGGAA TTACTACATC ATGAGCCTTG AAGAGAAAAA TGAACCACAT TGGCATTACA AAATAAACTC AAAAGGTAAA AAGGTATATT ATTTTGGAAT ATTTAGTCCA TCTATGCCCG ATTTTAACTT AAATAACGAG GAAGTAAAAA AACTACATAA AGAAATATTA AGCTATTGGA TAAATTATGG AGTTGATGGT TTTAGATTTG ACGCTGTAAA ACATTTCTTT GGAGATGATT GGGATAATGG AATAGAAGAT TCAAGTAAAT ATTCCCAAGA ATTAGCAAGG TATGTAAAAT CAATAAAGAA AGATGCCATA ATCGTAGGAG AAGTATATGA TGGTAACATA GATACGTTAA AAAAATTTGC TCCAATGCCT GTGTTTGATT TTAATTTTAT GTTCAATATA AGAGAAAATT TTGAAGGAAA AGATAACCTC TTATCTACTT GGTATAAAGA GGTGAATTAT GAAGAAATTA CACCAAACTA TTTTCCATTT ATCAACAATC ACGACTTAAA TAGATTTATA TCAGTCTTGT GTGATGAAAA ATACAAAGAT ACATATCACG GGACAATACA ATTTGCATTA CTTAATAGCT TACTTGTAAT GTTAGAAGGG CTACCTACTA TATATTACGG TGATGAAATT GGTTTAAAAG GCTTTAAATG GAATGGGCCA GTTTATGATG AGCCTGTTAG AGAACCTATG CAGTGGTATG CCTCACAAAG CGGAGAGGGA CAAACGAATT GGACAAAAGA AATCTATATA TCAAACAATA TCACATTTGG AAATGCAAAT ATAGATGGTG CAATATACGA TGATCCATAC GATGGTATAT CAGTTGAAGA ACAGGAAAAT GAAAATTCTT TGCTAACTTA CTTTAAAACC CTCTTTAATT TAAAAAAGGA ATACTACTCT CTTTCACATG GAACAGTTGA AATATTAAAA AATTGGAAAA ACCTAATTGT CTTGAAAAAA ACTTATTTTA GCCAAGAGGC TTTGGTAATA TTTAACTTAG ATCCATTCTA TTCAAACAAT TTTACAATTC CAAAAGATTA CAAACAAATC TTTTATGCTA ACCTAAATGA TTTTACTTTT GAAAAAGTTG AAAAGATTAT AGAAAAAGAT ACAAATTACA TTATTAACCC AAGACAAGTT TATATATTTA TAAAATAA
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Protein sequence | MKKGILLFLV ILLIFSSCVK TSPVILNISL YGDIEKLDSS KTFKVQSFEE NIQIERYKLK ILQEKKLIFE KDITTNFHIN LGEIIPGKYT IRIDAYEKDN LILYGEKEAL LSYGENNITI YTRFTNGKLV ITLSSDGNTI TQSKITGTLP ASPVNTFIEE NKTYIEKEVY PGVWEITIDA TLNDNINKNY NTVIEILPSK TKEINFEINN SGITIMPVLP YLEKINNTTA QLDNEGIKLY WDYDLPATFW IYKGSNDFDI SFVGTTTNNY FIDKNPLKEK YFYYVNAILD GKESGLTKID AKKIIDEIFS SNIMYLLFVR SFFDSNNDGI GNLKGITQKM DYLKDLGISV IWLMPIFKAT SYHGYDVVDY YNINPEYGTI EDLKELLEKA HENNIKVILD IPLNHSSDEN IWFKDAIENT TNSKYWNYYI MSLEEKNEPH WHYKINSKGK KVYYFGIFSP SMPDFNLNNE EVKKLHKEIL SYWINYGVDG FRFDAVKHFF GDDWDNGIED SSKYSQELAR YVKSIKKDAI IVGEVYDGNI DTLKKFAPMP VFDFNFMFNI RENFEGKDNL LSTWYKEVNY EEITPNYFPF INNHDLNRFI SVLCDEKYKD TYHGTIQFAL LNSLLVMLEG LPTIYYGDEI GLKGFKWNGP VYDEPVREPM QWYASQSGEG QTNWTKEIYI SNNITFGNAN IDGAIYDDPY DGISVEEQEN ENSLLTYFKT LFNLKKEYYS LSHGTVEILK NWKNLIVLKK TYFSQEALVI FNLDPFYSNN FTIPKDYKQI FYANLNDFTF EKVEKIIEKD TNYIINPRQV YIFIK
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