| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0682 |
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| Symbol | |
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| ID | 5296734 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | + |
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| Start bp | 722087 |
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| End bp | 724312 |
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| Gene Length | 2226 bp |
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| Protein Length | 741 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 640768962 |
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| Product | heavy metal translocating P-type ATPase |
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| Protein accession | YP_001305931 |
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| Protein GI | 150020577 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2217] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0741733 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTACCCA TATGGGGAGG GATAAGCGAG GTGAAGAAAA TGGAAGAAAA AACATCATTT
ACCATAACGG GAATGACTTG TGCAAACTGT GCCAGAACCA TAGAAAAGGC ATTACTTAAA
TCTGAAGATA TAGAATTTGC CGCAGTAAAT CTTGCAACAA ATACAGGTTT TGTTGTGGGC
AAAAACATTG ATATGGAAAA AATCAAAAAA ATTGTTGAAA GTGTTGGATA TGGAATATCC
GATAAACCAG CTGAAAAAAT TGAAGAAGAA AGATACAAGC GTATAAAGAA AAACCTTATA
GTTTCTCTTA TATTCACAAT TCCAATATCT ATATTGATGA TCATAAACAT GTTTTTCCAA
AAAATCTCAT ATTTTACATT CTTAGAGACT GTGTTTGGAG CAATTGTTAC TTTCTACGCA
GGTCGAGATA CTATAAAAGG TGCATGGATT GCCCTTACAC ACAAACACAC CAATATGGAT
ACATTAATAT TCTTCGGATC AATTGCCGCA TGGTCAACTT CTGTTTTATC TTTACTTGGA
ATTGAAATTG GTTCATTTGG TGCAATTGGA ACTATGATTA TTTCATTCCA TTTACTTGGA
AGATTCATAG AATCATATCT TAGGGATAAA GCAGCAAAAG AAATTAAAAG TCTTATAAAC
CTACAAGCAA AAGAAGCCAG AGTTATTTCA GAGAATAAAG AACTAATGCT ACCTATTGAA
GCTGTAAAAG AAGGAATGAT TGTTTTAGTA AAACCGGGAG AGAGAATTCC GATAGATGGT
GAAATAATTG ATGGAAAATC TGGCATTGAC GAATCAATGA TTTCCGGTGA ATCATTACCT
GTGGAAAAAG GAATTGGTGA TGAAGTAATC GGTGGTTCAT TAAATTTAAC AGGAGTGTTA
AAAATCAAAG CAACAAAAAT AGGTAAAGAC TCTTTTCTTT CACAAATGAT CAATCTAATA
AAAGAAGCAC AAGGAGCTAA AGTCCCAATC CAAGCACTTG CAGATAAAAT AACCAATTGG
TTTGTTCCTG TAATAATATC ACTTGCAATA TTTAGTGGTC TTTTCTGGTA CTTTGGTTTT
GAAAACTTTT ATCCTCTCAT AGAAAAAGCA AGTAATTATC TTCCGTGGAT ACTAAAAACC
AATAATCCAG TTTCTTTCGG TATATTTGTA TTCGTTGCAA CAATCGTCAT AGCATGTCCA
TGTGCACTCG GACTTGCTAC ACCTATGGCA TTGATTACCG GTACAGGGCT TTCTGCAAAA
AGAGGTCTTT TAATTAGAAA TGCAGAATCA ATACAAACAA TGAAAGACAT AAAGTACGTT
TTAATGGATA AAACGGGAAC AATTACCGAA GGACATCCAA GTGTCGTTGA ACACAACTTA
GATGAAATGA CTTTAAAAAT TGCTGCATCT ATAGAAAAAA ACTCAAATCA TCCATTGGCA
AAGGCTATTT CGGACCTTAC AAATGAATAT ATACAAGTAG ACAATATAAA TGAAATTTCC
GGTGAAGGAA TAGTAGCCAA TGTCAACGAT ATAGAATATT TTGTCGGAAA ACCTCTTGAT
TATTCAAAAT ACTCAGAACT AACTGAAAAA GGATACACAG TAGTTGAAGT AAGGGAAAAC
AAAATTATAA AAGGGTATAT AGTCATCGTA GATCCCATAA GACCTGATAC AAAAAACTCA
GTAAAAATTT TGAAGAATAT TGGTATAACA CCTATTATGG TAACAGGTGA TAATGAAGAA
ACAGCAAGAC AAGTTGCAAA GCAAGTGGAC ATCGAAACAT ATTATGCACA AGTAAAACCA
AATGAAAAAT TGGATATTAT AAGAAAATAC CAAGCTAAAG GACAAAAGGT CTTAATGGTT
GGTGATGGAA TGAACGATGC CGCAGCATTA AAAGGGGCAG ATGTAGGTAT AGCAATTGGA
ACTGGAACAG ATCTTGCTAT AGAAAACGCA GACATAATAA TTACCAAAGA AGGGATTTCT
AAAATAGTGG ATGCAATAAA AATTTCACAA CTTACTTTTA AAGTTATAAA ACAAAATCTC
TTTTGGGCAT TCTTTTACAA CATAATAGCA ATCCCCATGG CTATGATGGG GTTATTACAT
CCTGCAATAG CAGAAGCTGC AATGGCTTTT AGTTCAATTA CCGTTATACT CAACTCATCT
AAAATAAACG AAAAAAGATA CGTTAAAACA CTTTTGGATA ACGAAAAAAA AGCTTGTTGT
ATGTAA
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| Protein sequence | MVPIWGGISE VKKMEEKTSF TITGMTCANC ARTIEKALLK SEDIEFAAVN LATNTGFVVG
KNIDMEKIKK IVESVGYGIS DKPAEKIEEE RYKRIKKNLI VSLIFTIPIS ILMIINMFFQ
KISYFTFLET VFGAIVTFYA GRDTIKGAWI ALTHKHTNMD TLIFFGSIAA WSTSVLSLLG
IEIGSFGAIG TMIISFHLLG RFIESYLRDK AAKEIKSLIN LQAKEARVIS ENKELMLPIE
AVKEGMIVLV KPGERIPIDG EIIDGKSGID ESMISGESLP VEKGIGDEVI GGSLNLTGVL
KIKATKIGKD SFLSQMINLI KEAQGAKVPI QALADKITNW FVPVIISLAI FSGLFWYFGF
ENFYPLIEKA SNYLPWILKT NNPVSFGIFV FVATIVIACP CALGLATPMA LITGTGLSAK
RGLLIRNAES IQTMKDIKYV LMDKTGTITE GHPSVVEHNL DEMTLKIAAS IEKNSNHPLA
KAISDLTNEY IQVDNINEIS GEGIVANVND IEYFVGKPLD YSKYSELTEK GYTVVEVREN
KIIKGYIVIV DPIRPDTKNS VKILKNIGIT PIMVTGDNEE TARQVAKQVD IETYYAQVKP
NEKLDIIRKY QAKGQKVLMV GDGMNDAAAL KGADVGIAIG TGTDLAIENA DIIITKEGIS
KIVDAIKISQ LTFKVIKQNL FWAFFYNIIA IPMAMMGLLH PAIAEAAMAF SSITVILNSS
KINEKRYVKT LLDNEKKACC M
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