| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0681 |
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| Symbol | |
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| ID | 5296608 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 720892 |
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| End bp | 722004 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 640768961 |
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| Product | radical SAM domain-containing protein |
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| Protein accession | YP_001305930 |
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| Protein GI | 150020576 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4277] Predicted DNA-binding protein with the Helix-hairpin-helix motif |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0554713 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTTTAG AAAGAAAATT AAAATTATTA ACAGAGCACG CAAAATATGA TGTTTCGTGT
TCTTTTGGAA CCAACGAAAG GTATGTTTAC TATAGTAAAA GTGTAAAAAA GCTAAGGCCC
ATATTGAAAG TGTTATTTTC AAATGCATGT GTGTATGATT GTGCATATTG TATTAATAGG
AGATCTAACA ATATTGAAAG GGCAACTTTT ACCGTTGATG AACTTGTTGA AATAACTACC
ACTCTTTACA AAAAAAACTA TGTTGTTGGC TTGTTTTTAA GTTCGGCGGT TATTAAAGAT
CCAAACTATA CTATGAAACA GATGTTGAAA GTGGTTAAAC AATTGAGAGT AAAGGAAAAT
TTTCCAGGGT ATATTCATCT GAAAATAATT CCAGGTGCAG ATGAAAAGCT TGTGAATGAG
GCGGGAGTTT TTGCCGATAG AATAAGTATT AATGTAGAGT TTTTAAGAAA AAATGATTTT
TATCTTTTAA CACCGGAAAA AAAACCTGAA GATATTCAAA AACCACTTTC AATAGCTGCA
GAAAAATACG AAGAGTATTT TCATCAAAGA AGAAAATACA AAATACAACC ATTTTCACCA
GATGGTCAAA CCACACAGTT AATAGTTGGA ATATCAAAAC AAAGTGATAA AAAGATATTA
TCTTTTGCTT CAAAACTTTA CAGAAATTAC AAATTAAAAA GGGTGTATTA TTCTGGATAT
GTTGCTATAA ATAAAGATAA GCGCCTACCG AATACTAGCG AAAGTATTAT GAGAGAGCAT
AGACTTTATC AAGCAGATTT TCTACTGAGG TTTTACAATT TTACTTTAGA CGAAATATTC
GAAGATTCTG AAAATTTGGA TTTAAATTTA GATCCAAAAT TAAGGTGGGC ACTAAACCAT
CCTGAATTCT TTCCCATAGA TATTTCAAAA GCATCTTTTG ATGAGCTAAT AAGAATACCT
GGTGTGGGAA TTAATAAGGC AAAGAAAATA ATTTTACTGA GAAAAGAGGG AAGATTAAGC
TTTGAAACGT TGAGAAAGAT AGGAGTTTTT ATTAACAATG ATTTTATTGT GTTGAAAGGG
AAACGTGTAT CAGCTCCATT ATTTAATTTT TAG
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| Protein sequence | MVLERKLKLL TEHAKYDVSC SFGTNERYVY YSKSVKKLRP ILKVLFSNAC VYDCAYCINR
RSNNIERATF TVDELVEITT TLYKKNYVVG LFLSSAVIKD PNYTMKQMLK VVKQLRVKEN
FPGYIHLKII PGADEKLVNE AGVFADRISI NVEFLRKNDF YLLTPEKKPE DIQKPLSIAA
EKYEEYFHQR RKYKIQPFSP DGQTTQLIVG ISKQSDKKIL SFASKLYRNY KLKRVYYSGY
VAINKDKRLP NTSESIMREH RLYQADFLLR FYNFTLDEIF EDSENLDLNL DPKLRWALNH
PEFFPIDISK ASFDELIRIP GVGINKAKKI ILLRKEGRLS FETLRKIGVF INNDFIVLKG
KRVSAPLFNF
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