Gene Tmel_0675 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_0675 
Symbol 
ID5297284 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp713440 
End bp713883 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content32% 
IMG OID640768955 
Productsignal transduction protein 
Protein accessionYP_001305924 
Protein GI150020570 
COG category[K] Transcription 
COG ID[COG2524] Predicted transcriptional regulator, contains C-terminal CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGTTA AAGATTTCTA TATTAGAGAC ATAACAGCCG TATTGGAAGA TGAATCTGTT 
TCTAGGGTAT TAAAGATTCT TTCCAGACAA GAAATAACAG GAGTACCTGT AGTTAATGAG
GATTACAAAG TTGTTGGATT TATAAGTGAA AACGATATAA TAAGAGCAGC GTTGCCAAGT
TATTTTTCAC TTTTACAAAC TGCCTCTTTT ATACCTGACT TAAACCAATT TGTTAGGAGT
TTGAAAAAAA TTTCAAATAA GTCTGTATCT GAAATTATGA CAAAACCTGC AATTGTGATA
AAAGAAGATA CTCCACTTTT ACATGCTGCA GATTTAATGA TAAGACATAG CTTAAAGATC
CTTCCTGTTG TTGATGATGG CGAGAGATTG GTTGGGGTAA TTACAAGAAT GAGAATTTTA
GATACTGTAA GTAGGGAGGA TTAA
 
Protein sequence
MKVKDFYIRD ITAVLEDESV SRVLKILSRQ EITGVPVVNE DYKVVGFISE NDIIRAALPS 
YFSLLQTASF IPDLNQFVRS LKKISNKSVS EIMTKPAIVI KEDTPLLHAA DLMIRHSLKI
LPVVDDGERL VGVITRMRIL DTVSRED