| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0660 |
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| Symbol | |
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| ID | 5297235 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 698656 |
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| End bp | 701127 |
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| Gene Length | 2472 bp |
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| Protein Length | 823 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 640768940 |
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| Product | polysaccharide export protein |
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| Protein accession | YP_001305909 |
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| Protein GI | 150020555 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAAAT TTTTGATTAT GCTCATGGTT ACAGCCAGTA TCTTTTTATT TTCCTATACA
CTTAGACCTG GCGATGAGGT TAGTATATAC GTTTTTGGGC AACCAGAATT GTCCTTACAA
GTAGTTGTAT CAGTTGATGG TACAATTTCA TATCCCTTTG CAGGAGAAAT ATATGTAAAG
GGAAAAACTA CTAAGGAATT GGAAGAAATA ATTAGGGAAT ATGTAAAAAA AGTTATTAAA
GATCCAATAG TTACAGTATA CATTTCCAAA TATGCTCCTA TGTATGTGTA TATACAAGGA
GCAATTAATA CTTCATTTGA TATTTCTGTG GATAATAACA TGACGCTTTC AAAACTAGTT
TCATTTTTAA ATCTCTCAAC AAAAACAACA TTTGATTTTT CAAATATTAA GTTAAAAAGA
AACAATAAAG TTTTTTATGT AAATCTTGAA GATTACTATA ACGGAAAATT TGATGAAGAT
GTGGTGTTAG AAGAAGGGGA TATAATATAT ATTCCGATAC AAAAAGATAA AGTAGCATAC
ATTACAGGAC CTGTGAAAAA TCCTGGAGAA TTTTCTTTTT CAGAAGCAGA AAATATTACT
CTGTCTCTTT TACTTGCAAA AGCGGGAGGT ATTTTAGATG AAAAGAGAAG ATATATAAAA
GAAGTAGAGA TTGTAGAAGA TAATGTTTCA AAAGTGTATT CTTCTGATAT ATTGGAAAAG
GATATACAAC TTAAGAGAGG AGCAATTGTT AATATAAAAA CACATTCAGA GTTTTACGTG
TATTCAAATG GAATGAAAAT AGAGTTTTAT CCAGATGAAC CTAAAACGTT GGGAATGCTT
GTCGCTAAGG TGCTGGTTGA TGTTGATAAA CAAGAAATTT TAAATGATGG GTTTGCGATT
ATAAATGGAA ACAAGAAGAT ACCAATTAAA GGTAACGAAA ATTTGAAATT GGATTCTGGA
GATGTTGTAG ATATTATTTA CGCTCCGTTT ACGGTTAATG TCGTGGGATA TAAGGGAGGA
GTTGTTAATT TAACTTCCAA AGAGCCTAGA ACTTTATCGT ATTTGATAAA AAAATTGGGA
GTTGATGATA TAGAAAGTAT GTTAGATGTT TATGTTAGCG GAAAAAGCTA TAAAATAGAG
GATTTAGTGT TTGGCAGAAC AGACAGAGAA TTAGAAAAAG GAGAAACAGT TGTAATAAGA
TACCTAGGTG AAAATGTGGT ATATATAGTA GGTGATTTTT CAAGTTATGT GAAATTTCCA
TTTAACGAAA AAATAACACT TTATAAAGTT CTTTCAAGGG CAAGAATTTC AGATTTAAAA
AGAATTGAAA GAGTAGAAGT AAATGGAAAG AAATTAGATG TAACAAAAGA TACAGATATT
GATAGCGGAA CAATTTTAAG AATAACTTTA AAGAAACCTA TTCATGTTAC CGTTATGGGA
TATGTAAAAA AAGAAGGTAC ATTTGCATTT AATTATACAG AAAAAAGTGA TTTAATCACA
CTTTTTGGAA AATCAGGAGG ATTTTATTTA GGTCCAAAAC TATATTTTAT ATCTGATTTT
GTATATGTAA TTAGAAATAA CAAAGTAATT TCTAAAATAA ACGTCGAAGA TATTCTTGAA
GGAAAGAAAA ATATGGAATT AAAAGATGGA GATTTTGTTT ATGTAACAAG TAGAGAAGTA
GGACATGTAT ATGTTTTTGG TTATGATGGC GAAGAAAGAA AATATAGTTT GATTAAATTT
ACTAGAGGAG AAACTTTTGA CCTAAAAACT TTAATAGCAA AATTAGGAGG TATAAAGAAG
GGAATTAGTA AGAAAATAAC GATTCTAACA AAAGATGGTA AAAAAACTGT AGATTGGAAT
GAAAATGTAG CTTTGGAAAA CGGTGCAACG GTTTTGTTTG AAAGAGACAG AAAAAATTAC
GTTTATGTAG TGGATAAAGA CGGGAAAGCA AATACCTTTT ATTTAGATGA GCCAATTAGC
TTGTTTGAAT TAATAACAAA CTTTGATGTT AACAAAAATT ACAAAAAATT GGAAGTATTG
AGTGATGGTA CTAAAATTTC GATTGATGTA TCAGATGTGG AAAAGACATT AGGATATATC
ATAAAACCTG GAGATGTTGT AAAAATATTG GATGTTCCGC AAAATGTAGC GTATGTTTTA
GGAGAAGTGA ATAAACCTGG AATAATTTCT CTGAATAAAG GTACAACAGT TTTAGAAGCG
GTAATACAGG CGGGGTATAT CAATCAAAAC GCATCACTTT CTTCCGTTTA TCTGTATAAA
GGAGGGTTAA ACGGAAAAGC AATAAAGATA AATTTAAACG ATGTAATTAA AAATAAAACA
AAAGATTTAG TTGTCGAACC TGGGGATATA GTTTATGTGC CTTCTGATCC TTTCAAAAGT
GCACTTGATT GGATACCTGT CATAAATAAT ATACTAAGTT TATATAACAA TATAAGTACT
GCAGTAAAAT AA
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| Protein sequence | MKKFLIMLMV TASIFLFSYT LRPGDEVSIY VFGQPELSLQ VVVSVDGTIS YPFAGEIYVK
GKTTKELEEI IREYVKKVIK DPIVTVYISK YAPMYVYIQG AINTSFDISV DNNMTLSKLV
SFLNLSTKTT FDFSNIKLKR NNKVFYVNLE DYYNGKFDED VVLEEGDIIY IPIQKDKVAY
ITGPVKNPGE FSFSEAENIT LSLLLAKAGG ILDEKRRYIK EVEIVEDNVS KVYSSDILEK
DIQLKRGAIV NIKTHSEFYV YSNGMKIEFY PDEPKTLGML VAKVLVDVDK QEILNDGFAI
INGNKKIPIK GNENLKLDSG DVVDIIYAPF TVNVVGYKGG VVNLTSKEPR TLSYLIKKLG
VDDIESMLDV YVSGKSYKIE DLVFGRTDRE LEKGETVVIR YLGENVVYIV GDFSSYVKFP
FNEKITLYKV LSRARISDLK RIERVEVNGK KLDVTKDTDI DSGTILRITL KKPIHVTVMG
YVKKEGTFAF NYTEKSDLIT LFGKSGGFYL GPKLYFISDF VYVIRNNKVI SKINVEDILE
GKKNMELKDG DFVYVTSREV GHVYVFGYDG EERKYSLIKF TRGETFDLKT LIAKLGGIKK
GISKKITILT KDGKKTVDWN ENVALENGAT VLFERDRKNY VYVVDKDGKA NTFYLDEPIS
LFELITNFDV NKNYKKLEVL SDGTKISIDV SDVEKTLGYI IKPGDVVKIL DVPQNVAYVL
GEVNKPGIIS LNKGTTVLEA VIQAGYINQN ASLSSVYLYK GGLNGKAIKI NLNDVIKNKT
KDLVVEPGDI VYVPSDPFKS ALDWIPVINN ILSLYNNIST AVK
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