| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0659 |
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| Symbol | |
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| ID | 5297382 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 696625 |
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| End bp | 698640 |
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| Gene Length | 2016 bp |
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| Protein Length | 671 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 640768939 |
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| Product | lipopolysaccharide biosynthesis protein |
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| Protein accession | YP_001305908 |
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| Protein GI | 150020554 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAATC AAGTAGAAGA ACTTACATTA TCGGATATTT TACATATATT TAAAAAAAGA
CAATTGTGGT TTTGGATGGT TTTTGTTTTA ACAATAGTTG CAACGGGTGT TTACCTTGTA
TTTTTTGCAA CTCCTATTTA CGAAGTTAGC GTGAAGATAA AGATTCCATC TAAATCTTCT
TCTCCATCTT TGAGTTCTTT GTCTGGAGCG GCAGCTTTGA TGCTTGGTGG TGGAATGACT
TCACTAGGTG TTTCAGATGA GATGGAATTG ATAAAGAGTA GAAGAACTTT GCAAAAAGTT
ATTAAAGACC TTAATCTTAT GGATTATTTT AAAAGTAAGA TAAAAGATGA AGAAGGCAAA
GAAAAATTAA CCTTAAATTC AGTTATTGAT AAATTGCAAG AAGAAGTAAT TTCGGTTGAA
ACAGTAAAAG ATACTTCTTT TGTAGAAATA AAAGTAAGCC TGGATGACAA AGAAATGGCA
TATAAACTTT CTAAAAAAAT ATTAGAGGCG TATACAGAGG TTTCAAAAGA ACTTAATAAA
GATCAAAATA CCTATATGGT TGAATTTATT GAAAAACAAC TTCCTCAAAC AGAAAAAGAG
TTAGAGAAAG TGGAAGAAAG GTTGAAGAAA TTTAAGAAGG AAAAATCTAT ATTACCGTCG
AAAGAAGCTG AACTGCTAGT TGATAATTTA GCAGAGTTTG ATAAAAAATA CTATTCTGCT
CAGCTTGAAC TTACTGGTTT AAAGATAAAA TTTGAAAATC TTAAATCATC TATTTCTCAA
TTTAAAGAAC TTATAAGTAA ATTAGATTAC GTTCCCAATA GTCCTGTGAT TTCTTTGTTA
AGAGAAAAGC TTGTAGAATA TCAAATAGAA TATCAAGGAC TTCTTCAAAA ATATTCTCCA
GATTCCATAG AGGTAAAAGA GATTGAAGTT AAGATAAATG AAATAGAAAA AAAGATAAAA
GAAGAGATTG ATAACATTGT AAAAAGTAGT TTTAATATGG ATGATCCAGT ACTTTCAAAT
ATTTATACTC AATTGGTTGA AACACAAGCT GCGTTGGAAA TTTCAAAAGC AAATTTAGAA
TCACTTGTAA AATTAAGAGC AAAGTTTGAA GAAAAATTGA AAGAGCTACC TGATATAGAA
ATGGAATATA TAAATCTTGA AAGAGATTAT CAGTTAAAAC AAAATGCTTA CATTTTGTTA
AAGACAAAAT TGGAAGAGTT GAAATTATCC ACAGCTGGTT TTAATTTTAA TGCACCAATA
ATCGTAGATG AACCATTTAT TCCTGAAAAG CCGTCAAAAC CAAATAAGAA ATTAACACTT
GCAATTGGTG GAGTGTTGGG AATATTTATT GGAATTTTAT TTGTTTTTGT AGCAGAAGCA
AGGGATAAAA AAATAAGAGA TTGGTTTGAT GTAGAAAAAA CAATTGGAAA AAAACCTATT
GTTTTAGTTG AACCAGATAT GAACCTTTCC ATTTTTAAAG CGCCTGGTTC AAGATATTCA
AATTTAGTTG AAAAAATTGC TATGAAGATT GTTAGTGATA GTAATCCAAA TGTTATAGGC
ATAACATCTG TTGGAAGTTT TAGAGAAAAG GAGATTTTTA GTGCAAATTT TGCGGGATTT
TTTGCAAAAA GTGGTAAAAA AACTTTGCTT TTAGATTTTG AGAATAGTAT GTATAAAATC
TTTGATGTTA ATGGTGGAAA AACTCTTGTC GAAGTGCTAA AGAAAAATAA TGATATACAA
AAGGTGGAAG AAAATCTTTA TTTAATAATT AAAGGGAGAG AAAATGTAAA CGATATTTTA
ATTTCAGAAG ATTTTGAAGA GTTGATGAGG AGATTTAAGG AAGAGTTTAA CTATGTGATA
ATAAATCTTC CAGGTTCTGA TTCTTCCAGT ATACCACTTT TAAAAAAGCT TTGTGATGAG
TTAATTTTGG TTGTAAAAGA AAAAATTACT GATAAGGAAA AGTTTATTGA AAGTATGGAG
GAGCTAAAGA CAAGATACAT AGTATTGAGC GAATAA
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| Protein sequence | MENQVEELTL SDILHIFKKR QLWFWMVFVL TIVATGVYLV FFATPIYEVS VKIKIPSKSS
SPSLSSLSGA AALMLGGGMT SLGVSDEMEL IKSRRTLQKV IKDLNLMDYF KSKIKDEEGK
EKLTLNSVID KLQEEVISVE TVKDTSFVEI KVSLDDKEMA YKLSKKILEA YTEVSKELNK
DQNTYMVEFI EKQLPQTEKE LEKVEERLKK FKKEKSILPS KEAELLVDNL AEFDKKYYSA
QLELTGLKIK FENLKSSISQ FKELISKLDY VPNSPVISLL REKLVEYQIE YQGLLQKYSP
DSIEVKEIEV KINEIEKKIK EEIDNIVKSS FNMDDPVLSN IYTQLVETQA ALEISKANLE
SLVKLRAKFE EKLKELPDIE MEYINLERDY QLKQNAYILL KTKLEELKLS TAGFNFNAPI
IVDEPFIPEK PSKPNKKLTL AIGGVLGIFI GILFVFVAEA RDKKIRDWFD VEKTIGKKPI
VLVEPDMNLS IFKAPGSRYS NLVEKIAMKI VSDSNPNVIG ITSVGSFREK EIFSANFAGF
FAKSGKKTLL LDFENSMYKI FDVNGGKTLV EVLKKNNDIQ KVEENLYLII KGRENVNDIL
ISEDFEELMR RFKEEFNYVI INLPGSDSSS IPLLKKLCDE LILVVKEKIT DKEKFIESME
ELKTRYIVLS E
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