| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0652 |
|---|
| Symbol | |
|---|
| ID | 5296551 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermosipho melanesiensis BI429 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009616 |
|---|
| Strand | - |
|---|
| Start bp | 688208 |
|---|
| End bp | 689095 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 640768932 |
|---|
| Product | NQR2 and RnfD family protein |
|---|
| Protein accession | YP_001305901 |
|---|
| Protein GI | 150020547 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG4658] Predicted NADH:ubiquinone oxidoreductase, subunit RnfD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.114634 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATTTCT TTCAAAAGCA ACCTATGATG CGAAGGGTTA TTTATGCTTT ATTTCCCATA
TACATATATG CATTTTTATT CTATGGTTTT AGGCTTGTTT TTTTAAGTAT TTTGATATTT
ACAGCAGGGA TTTTAACAGA ATATTTGTTT GAAAAACGAA AGAATAAAAA GGTTTCAGAA
GCAGTGCTAG TAAGTTGTAT GCTTTATACA TTATCTTTGC CACCTAATGT TCCATGGTGG
ATTGCGGTTA TAGGAATAGT ATTTGGAATA GCTATTGCAA AAGAAGCATA CGGTGGATTT
GGAAGGAATG TATTTAATCC TGCTATTACT GGAAGGCTAT TTGTATATGT TACATTTCCG
ACTTTTATGA CAAGTGGTTG GTTAGTGGCA AAGTTTGGAT CATTTGGAAA AGATGCTATT
ACTTCAGCAA CACCACTTGC TATTTTACGT TATGGAGGTA GTGTTGATAT AGCAAAGCTA
TTTCTTGGTT TAAGGGCAGG TTCTTTTGGT GAAGGTGCAA TGTTTCTGAT ATTATTAGGA
GCAATATATC TTATTGTTAC GAGAACGGCA AGTTTTAGAA TAATGCTTTC TACCTTTCTT
TCTGCATCTG CCTTTATTTT ATTATTTGAT TTATTTTTAG GAAAAATGCC ATTTTTACTT
GCAATTTTAT CAGGAAGTTT AATATTTGTT TCTGTATTTA TAGCAACAGA TCCTATTACT
GCACCAAAAA ACAAAAAGGC ACAGATAATT TACGGATTAA TAATAGGGAC TTCTATTGCG
GTGATAAGAA GTTTTTCTTT GTTTTCAGAA GGTACAAGTT TTGCGATATT ACTTGGAAAT
ACATTTGCTC CCCTTCTTGA CTTTTTGACA AAGAAGGTGA AAAAATGA
|
|---|
| Protein sequence | MHFFQKQPMM RRVIYALFPI YIYAFLFYGF RLVFLSILIF TAGILTEYLF EKRKNKKVSE
AVLVSCMLYT LSLPPNVPWW IAVIGIVFGI AIAKEAYGGF GRNVFNPAIT GRLFVYVTFP
TFMTSGWLVA KFGSFGKDAI TSATPLAILR YGGSVDIAKL FLGLRAGSFG EGAMFLILLG
AIYLIVTRTA SFRIMLSTFL SASAFILLFD LFLGKMPFLL AILSGSLIFV SVFIATDPIT
APKNKKAQII YGLIIGTSIA VIRSFSLFSE GTSFAILLGN TFAPLLDFLT KKVKK
|
|---|
| |