| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0650 |
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| Symbol | |
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| ID | 5297491 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 687011 |
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| End bp | 687607 |
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| Gene Length | 597 bp |
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| Protein Length | 198 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 640768930 |
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| Product | RnfA-Nqr electron transport subunit |
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| Protein accession | YP_001305899 |
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| Protein GI | 150020545 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1347] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrD |
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| TIGRFAM ID | [TIGR01939] NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.338076 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATAAGT ACAAAGAGGT ATTTTTAAAA AACGTATGGT ATGAAAACCC CGTATTTGTG
CTTGTTTTGG GAATCTGTTC AACGCTTGCT ATTACTAATA ATTTGAAGAA TACTTTGATA
ATGACAATAG GAGTTTTACT TGTTACGGGG TTTTCGAATC TTACCGTGTC CCTTCTTAAA
TCATTAATTC TCTCTAAAGT AAGAATGATT ACGCAGGTTT TAATAATATC TTTTTATGTG
ATAATAGTAG ATATAATTCT TAGGGTTTAT CTTCCAGATG TAAGTAAAGC CCTGGGACCA
TATGTAGGCT TAATTATAAC AAACTGCATA ATTATGGGGA GAGCGGAAGC ATTTGCACAG
TCTAATTCTC CGTTACTTTC TTTTTGGGAT GGAGTTACTA GTGGATTAGG ATATATGTTA
GTGTTGATGG TGATAGCGTT TTTTAGAGAA CTTTTGGGAT TTGGAACGAT CTTTGGATAT
AGAGTTATGC CAGAGGGTTT TGTAAATTGG ACGATAATGG TAATGCCACC AAGTGCGTTT
TTTATGCTCG CCTTGTTTAT TTGGATTGTA AAGGGAAGGA GTGGTGATAA TGCCTAA
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| Protein sequence | MNKYKEVFLK NVWYENPVFV LVLGICSTLA ITNNLKNTLI MTIGVLLVTG FSNLTVSLLK
SLILSKVRMI TQVLIISFYV IIVDIILRVY LPDVSKALGP YVGLIITNCI IMGRAEAFAQ
SNSPLLSFWD GVTSGLGYML VLMVIAFFRE LLGFGTIFGY RVMPEGFVNW TIMVMPPSAF
FMLALFIWIV KGRSGDNA
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