| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0632 |
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| Symbol | |
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| ID | 5297369 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 673090 |
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| End bp | 675075 |
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| Gene Length | 1986 bp |
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| Protein Length | 661 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 640768904 |
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| Product | glycine--tRNA ligase |
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| Protein accession | YP_001305881 |
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| Protein GI | 150020527 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0751] Glycyl-tRNA synthetase, beta subunit |
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| TIGRFAM ID | [TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.563385 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATATAT TTGAGATTGG GGTTGAAGAA CTTCCCACAA CAGAAGTAAA TAATATTCTT
TTACAGCTTG AAGAAAAGCT AGAAAAATTT TTTAAGGAAG AAGAGTTGAG ATATAGCGGT
TTAACAGTTT TTTACGCTCC AAGAAGATTT GGTTTTTTCA TAAAGAAAAT AGATGAAAAG
CAAAAAGATA AAACAATTGA GAAAAGAGGT CCCTCAAAAA CTGTGGCATT TGATGAAAAT
GGAAATCCAA CAAAGGCATT AAATGGTTTT TTAAAGTCAA ACAACGCAAG TATTAAAGAC
ATTGAAATAA GAAATAATTA CGTATTTTTA AGTAAAAAGG TAGAAGGTAA AAAAACAGAA
GAACTTTTAA AAGAGAAAAT CCCACAAATT ATTTACAGTT TGAATTTTAG AAAATCTATG
AAATGGGGGA ATGGTGAATT TTCATTTGTG AGAATACCCC ATTGGATTTT ATCGGTATAT
AAAGGAGAAA TACTGGAAAT AGAGTTATTT GGTATTAAAG CCTCAAACAA GACGTATGGT
CATAGATTTG TTGATGATAA CATAGTAGAG GTAAAAAGCA TAGAGGATTA TTTGGAAAAC
TTAAGAAGAT TAAAAGTGAT AGCCTTGCAT GGTGAAAGAA AAGAAAAAGT TTTATCATTG
CTAAAAAATT ATGAGACAAG CTTTGATGAA GGGTTAATAG ATGAAGTTGT GACGTTAACA
GAATATCCTA TTTTACTTGA AGGGAGATTT CTGGAAAAAT ACCTTTCACT TCCCGAAGAA
CTTATAACAA CTACGATAAA ACATCACCAA AGATCATTTA CAGTTTACAA AGGCGAGAAA
ATTACAAATA AATTTTTATC TTTTATTGAT TCTCCAAATG GGAATGTGGA TTTGATTAAA
AAAGGATATG AAAAAGTGGT AAACGCAAGA TTAGAAGATG CAAAATACTA TTATGAAAAA
GATTTAAAGG TTCCTTTAGA AAGTTTCAAT GAAAGTCTTA AGGAGATAGT GTTTCAAAAA
TCCCTTGGTA CCCTTATGGA TAAAGTAGAA AGGATTGAAA AAATTTCTGA AAAGATATGT
GAAGAATTAA AAATAGATTA TTCTGATAAA AAGCGAGTGT TAAGAACGGC ACATTTATGC
AAAGCAGACA TTGCATCTAG TGTAGTTTAT GAATTTCCAG AATTGCAAGG TGTAATGGGA
AGAATTTATG CTTTAAAGGA TGGAGAAGAT TACAACGTTG CCTTGGGTAT AGAAGAACAT
TACAGCGATG TACCTAAAAA TATAACTGGT GCAATAGTTG CAATTGCAGA TAGAGTAGAT
ACTGTTGTAG GGAATTTTAT CGTAGGTAAT ATTCCTTCTG GTTCTAAAGA TCCATTTGGA
ATTAGAAAAA AGGTAGATAC ATTATTTGAA ATTCCGAATG TTTTTTCCTG GGATATAGAT
CTTTTAGAGG TGGTAAAATT TTCTGCTGAG CTTTTTGGAA AAGGTATACC AAATGAGTTA
TTTGAATTTT TTGAAGCAAG ATATGAAGTG TTTAACTCAA ATACAAGGTA TGATATAGCA
AGAGCGGTTA AGAGATTTTG GAAAAGACCA CTTAGAGGAA GATTGATAGC CCAAGCACTA
ATGAATATAG TTGATAAAGA AGAATTTCAA AGTCTTTTAA TAGGTTTTGA AAGGGTACAT
AATATATCAA GTAAGTTTGA TTCATGTGAG TTTGATAGTA CAAAGTTTCT TGATAATGCA
GAAAAGGAGT TGTTTAATAA ATACATTGAG CTAAAACCAA GAATTTTGGA AGCATTGGAC
AATTTAAGCT TTGATGCCGC ACTTTTGTAT TTAGTGGAAT TTAGAAAATA TATAGACAGT
TATTTTGATA ATGTTTTTGT TATGACAAAG CAAGATGATA TTAGAATGAA TAGATTAGGC
TTTTTAAAAA GCCTAGATAG ACTCTTTTTA AAATTAGGAG ATTTGAATTT ACTTAAGAAA
AAATGA
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| Protein sequence | MYIFEIGVEE LPTTEVNNIL LQLEEKLEKF FKEEELRYSG LTVFYAPRRF GFFIKKIDEK
QKDKTIEKRG PSKTVAFDEN GNPTKALNGF LKSNNASIKD IEIRNNYVFL SKKVEGKKTE
ELLKEKIPQI IYSLNFRKSM KWGNGEFSFV RIPHWILSVY KGEILEIELF GIKASNKTYG
HRFVDDNIVE VKSIEDYLEN LRRLKVIALH GERKEKVLSL LKNYETSFDE GLIDEVVTLT
EYPILLEGRF LEKYLSLPEE LITTTIKHHQ RSFTVYKGEK ITNKFLSFID SPNGNVDLIK
KGYEKVVNAR LEDAKYYYEK DLKVPLESFN ESLKEIVFQK SLGTLMDKVE RIEKISEKIC
EELKIDYSDK KRVLRTAHLC KADIASSVVY EFPELQGVMG RIYALKDGED YNVALGIEEH
YSDVPKNITG AIVAIADRVD TVVGNFIVGN IPSGSKDPFG IRKKVDTLFE IPNVFSWDID
LLEVVKFSAE LFGKGIPNEL FEFFEARYEV FNSNTRYDIA RAVKRFWKRP LRGRLIAQAL
MNIVDKEEFQ SLLIGFERVH NISSKFDSCE FDSTKFLDNA EKELFNKYIE LKPRILEALD
NLSFDAALLY LVEFRKYIDS YFDNVFVMTK QDDIRMNRLG FLKSLDRLFL KLGDLNLLKK
K
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