Gene Tmel_0622 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_0622 
Symbol 
ID5296739 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp664975 
End bp665775 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content33% 
IMG OID640768893 
Productflagellin domain-containing protein 
Protein accessionYP_001305871 
Protein GI150020517 
COG category[N] Cell motility 
COG ID[COG1344] Flagellin and related hook-associated proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGATTA ACAATAGCGT TAATCTTTGG ATAACGCATA GACTTCTTTC TTTTCAAGAT 
CAAAATAAAG CCAACATGGC GGAAGTTGTT ACTGCCCAGA AACTACTCAC AAGTGATATT
GCAGGTGCAG CTATTTATGA AAGAATGAGA AGTCAAATTG AGAGATATGG TAAAGTTATA
GAAAATATTT ATACAGGAGT AGATATGTTA AATACAGCAG ACAGTGCTCT CTCTTCAATA
TATGATAACT TACAAAGAAT GCGCGAACTT GCAGTACAGG CTTCAAATGG AACACTTACT
GAAAATGAAA GGGCCGCTTT AAATGAAGAA TATAACCAAC TGCTTGAACA AATTAAAACT
ACAGTAAAAA ATACAGAATT TAACAACAAG CAACTATTAA CAGGTAATTT TGAGAATATA
GAAATACAAG TCAACCCAAA TGGCAAATCA CAAAACATAA GTATTCCAAA TGTCCAAACA
GATGCATTAA ACATTGAAGA TACTAATATA TTAACCATTG AAAATGCACA TACTGCCATT
GAAAGACTTG ATAATGCAAT TAATACTATT TCAGAAACAA GAAGTAATAT AGGCGCAAAT
GTAAATGCCT TAAAACAATA CGGAGCTGTT GCTGCAAACG CTTTTGAAAA TATTACTTCA
AGTACAAGTA ATATCCATGA TACGGATATA GCAAAAACTC TATTGGAAAT TACCAAAAAC
AATATACTTT CACAAACACT TCTCTCTCTC TCCACCCAAT CAAATATATC CGCATGGTCT
GTATTGCGGC TCTTAGGATG A
 
Protein sequence
MRINNSVNLW ITHRLLSFQD QNKANMAEVV TAQKLLTSDI AGAAIYERMR SQIERYGKVI 
ENIYTGVDML NTADSALSSI YDNLQRMREL AVQASNGTLT ENERAALNEE YNQLLEQIKT
TVKNTEFNNK QLLTGNFENI EIQVNPNGKS QNISIPNVQT DALNIEDTNI LTIENAHTAI
ERLDNAINTI SETRSNIGAN VNALKQYGAV AANAFENITS STSNIHDTDI AKTLLEITKN
NILSQTLLSL STQSNISAWS VLRLLG